Query= MSMg01no390_c23.b1 MSMg01no390_c23.b1 CHROMAT_FILE:
MSMg01no390_c23.b1 PHD_FILE: MSMg01no390_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:01 2005
(406 letters)
>mm_chr6_89393097_89393902
Length = 806
Score = 652 bits (337), Expect = 0.0
Identities = 346/351 (98%), Gaps = 4/351 (1%)
Strand = Plus / Minus
Query: 2 gattatatgggcccagactatattatctgctaggtataagtaatttcagcacaggactca 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gattatatgggcccagactatattatctgctaggtataagtaatttcagcacaggactca 292
Query: 62 agactgagaaatagggtttattgatagtcaatgcttacctatctcctacaatgcatattc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 agactgagaaatagggtttattgatagtcaatgcttacctatctcctacaatgcatattc 232
Query: 122 attaagaatcaatgccaaaagtcctgttatatggcctagcaggtaagggtactttaccac 181
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 231 attaagaatcaatgccaaaagtcctgttatatggcctagcaggtaagggtgctttaccac 172
Query: 182 cagcctgttgatgacctgaatttgatcttaagaacccacagagaattgacttccaataat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 cagcctgttgatgacctgaatttgatcttaagaacccacagagaattgacttccaataat 112
Query: 242 tgacatctgaccttcacacacacacac----tcaatcaatcaatcaaatttttttaagag 297
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 111 tgacatctgaccttcacacacacacactcaatcaatcaatcaatcaaatttttttaagag 52
Query: 298 tccatgtgaaggtaccaccttgacactttgtatttttaccttgttccccag 348
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 tccatgtgaaggtaccaccttgacactttgtatttttaccttgttccccag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_c23.g1 MSMg01no390_c23.g1 CHROMAT_FILE:
MSMg01no390_c23.g1 PHD_FILE: MSMg01no390_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:01 2005
(506 letters)
>mm_chr6_89187607_89188505
Length = 899
Score = 851 bits (440), Expect = 0.0
Identities = 487/510 (95%), Gaps = 15/510 (2%)
Strand = Plus / Plus
Query: 1 ccttgtctcctctctccatctctgtaggtccagagcattatggggaaggtagagagagac 60
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 201 ccttgtctcctctctccatctctgtaggtccagggcattgtggggaaggtagagagagac 260
Query: 61 atcattagcctgaaaggtggtaagagaggtgatacctgaagctaggatggtcagatgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcattagcctgaaaggtggtaagagaggtgatacctgaagctaggatggtcagatgtgg 320
Query: 121 ggcacaggcttctgtagctgggactaaagttatgtgtgctcacacaaagagccgaggctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcacaggcttctgtagctgggactaaagttatgtgtgctcacacaaagagccgaggctg 380
Query: 181 gagggaaagactcagcctgctggatgtggagagtgaatcactcgtggccaagagttatgt 240
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 381 cagggaaagactcagcctgctggatgtggagagtgaatcactcgtggtcaagagttaagt 440
Query: 241 acagaatttt----cttgctccatgagtgctgagctcactagagatcaatttggggaagg 296
|||||| |||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 441 acagaa----agcacttgctccgtga-tgctgagctcactagagatcaatttggggaagg 495
Query: 297 ggaaggggaagggacaggactaggaatggctaccttgcactgtagactcaattacccgag 356
||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ggaaggg------acaggactaggaatggctaccttgcactgtagactcaattacccgag 549
Query: 357 gcacagttggtgtcagtgtccatatttggaagcacaaatgcccatctcaaaactgaaaag 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gcacagttggtgtcagtgtccatatttggaagcacaaatgcccatctcaaaactgaaaag 609
Query: 417 acagagatgatggaaaggtaaggttgtaaaaatagagcttcctggctgcatgctattttt 476
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 610 acagagatgatggaaaggtaaggctgtaaaaatagagcttcctgactgcatgctattttt 669
Query: 477 ttcaagtgtgtgtgtgtgtgtgtgtgtgtg 506
||||||||||||||||||||||||||||||
Sbjct: 670 ttcaagtgtgtgtgtgtgtgtgtgtgtgtg 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 899
Length adjustment: 10
Effective length of query: 496
Effective length of database: 889
Effective search space: 440944
Effective search space used: 440944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
