CCCCCCCCCTCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCTGCAGGCATAATAAAAGAGAGGGGAAGGATAGTAGG
AGCCAGAGGGGTCAAGGACATGAGAATATGGCCCACAGAATCAACTAAGC
AGGGCTCATAGGGGCTCACAGAGACGGATTTGACAGTAATGGAGGCTGCA
TGGGTTTGAGCTAGGTCCTCTGCATATATGTCATGGTTTTATAGCTCAGT
GTTCTTGTGGGACTCCTAACAGTGGCGGTGGGGGTTGTCTCTGCCTCTTG
CCTGTTCTTGGGACCTTTTTTTCTTTCTACTCTGTTGCCTGTTCCAGCCT
TGATATGAGGGTATGTGCCTAGTCTTACTGTAACTCATTATAGCGAGTTT
GGTTGATAATCTTAGGAGGCCTGCTCTTTTCTGAAGGAGGAGTAGATCTG
AAGGACAGGAGATGTGTGTGTGTGTGTGTGTGGNGGNNNACTANNANGAG
TGTATNNTATATATTTGGTNTTTGGTTTGTTTGGTTTGTTTATGGTATTT
AAATAGAGGTTGGGATATTTTTATTGGTTTTTAAATAGAAGGTTGTGGTT
ATAAATATGTATTTTTTTATAAGAAATTATTTAATAGTATTATATTATTT
TGTTTAAGATGTTACCGGTATTTTCTCTTCCTCCCCCCCCCCCCCCTCAC
CCCCGTCCCCTCCCACTACCCCCCCCCCCCCCCCCCCTTCTCCCTTCCC

NNNNNNCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTCAAATCTAACCTGAG
ATGACTTTAAAAAAAATGCAAGCTCAGGATAATTCACTTTAAGTAGAAAA
AAATGTGCTGCAATTATCAGTTAAAAGCAGACAGAGCAATTATGAGTAAA
TGACCTGAGGAGAAAATAGAGGGAACTCTCACGAAATATGAGTCAGCAAA
ATGGGCATCATGTGGAAACACAGCTCCTAGAGATTGGACTAAGAGAAGCC
ACAGGAACCAGAGACGTTAATAAGGTTAGACCTCTCAACTTGGACCCTTG
GATCTGAGGCACAGTGCTTTCCAGAGAAAAACAAGGGCAATTTTATGTAA
AAAATGTTGAATTCAGAAGGCAAGGGCTGGCCCAAATTCATTCCTAATGA
GTGACAAAAACTTGTCCATTCATTTAATTTCTTTAAACACTAGATGGTTT
GTCTATAAAATGTCTGTGATAGAAAAATTATGTTTATGGTTCTATTTATA
TAGAATATAAATAGAATATATATATATATATGTATGTATGTATATATATA
TATACCTATATAGAGAGAGAGAGAGAGNGNNNGTNTTCCNTGGTANNTNN
NATTAANGNTGGNAGTGTTATTGTAAAAAATTAAATTTGAGGGAATGGAA
TAAGGGAAAAAAAGGATAAAAGTTTATAATAGAATTTTTTTTTG

Query= MSMg01no390_p23.g1 MSMg01no390_p23.g1 CHROMAT_FILE:
MSMg01no390_p23.g1 PHD_FILE: MSMg01no390_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:04 2005
         (544 letters)



>mm_chr6_73704167_73705109
          Length = 943

 Score =  864 bits (447), Expect = 0.0
 Identities = 516/545 (94%), Gaps = 17/545 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctcaaatctaacctgagatgactttaaaaaaaatgcaagctcaggataattcactttaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 740 tctcaaatctaacctgagatgactttaaaaaaaatgcaagctcaggataattcacttt-- 683

                                                                       
Query: 61  gtagaaaaaaatgtgctgcaattatcagttaaaagcagacagagcaattatgagtaaatg 120
                   ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 --------aaatgtgctgcaattatcagttaaaagcagacagagcaattatgagtaaatg 631

                                                                       
Query: 121 acctgaggagaaaatagagggaactctcacgaaatatgagtcagcaaaatgggcatcatg 180
           |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 630 acctgaggagaaaatagaggaaactctcacaaaatatgagtcagcaaaatgggcatcatg 571

                                                                       
Query: 181 tggaaacacagctcctagagattggactaagagaagccacaggaaccagagacgttaata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tggaaacacagctcctagagattggactaagagaagccacaggaaccagagacgttaata 511

                                                                       
Query: 241 aggttagacctctcaacttggacccttggatctgaggcacagtgctttccagagaaaaac 300
           ||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 510 aggttggaccactcaacttggaccctt-gatctgaggcacagtgctttccagagaaaaac 452

                                                                       
Query: 301 aagggcaattttatgtaaaaaatgttgaattcagaaggcaagggctggcccaaattcatt 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 451 aagggcaattttatgtaaaaaatgttgaattcagaaggcaagggctggcccagattcatt 392

                                                                       
Query: 361 cctaatgagtgacaaaaacttgtccattcatttaatttctttaaacactagatggtttgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cctaatgagtgacaaaaacttgtccattcatttaatttctttaaacactagatggtttgt 332

                                                                       
Query: 421 ctataaaatgtctgtgatagaaaaattatgtttatggttctatttatatagaatataaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ctataaaatgtctgtgatagaaaaattatgtttatggttctatttatatagaatataaat 272

                                                                       
Query: 481 agaatatatatatatatatgtat-gtat-g-tatatatatatatacctatatagagagag 537
           |||||||||| ||| ||| | || | || | || ||| ||| ||| ||||| ||||||||
Sbjct: 271 agaatatatagatagata-g-atag-atagatagatagatagatagctatagagagagag 215

                
Query: 538 agaga 542
           |||||
Sbjct: 214 agaga 210


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 943
Length adjustment: 10
Effective length of query: 534
Effective length of database: 933
Effective search space:   498222
Effective search space used:   498222
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)