Query= MSMg01no391_l22.b1 MSMg01no391_l22.b1 CHROMAT_FILE:
MSMg01no391_l22.b1 PHD_FILE: MSMg01no391_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:04 2005
(413 letters)
>mm_chr6_140311714_140312526
Length = 813
Score = 791 bits (409), Expect = 0.0
Identities = 412/413 (99%), Gaps = 1/413 (0%)
Strand = Plus / Plus
Query: 1 ggggagcatttgcagataaagaagaagcagcaaaaaccagtggggtgatgggcttacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggggagcatttgcagataaagaagaagcagcaaaaaccagtggggtgatgggcttacaaa 260
Query: 61 cacactgagagaacttagagagctcacaggctccaatgcaaataagaagtgttttaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacactgagagaacttagagagctcacaggctccaatgcaaataagaagtgttttaaaga 320
Query: 121 cctctgtggggctggagagatggctcagtggttaagagcaacgactgctcttccgaaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctctgtggggctggagagatggctcagtggttaagagcaacgactgctcttccgaaggt 380
Query: 181 cctgagttcaaatcccagcaaccacatggtggctcacaaccatccgtaatgagatctgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgagttcaaatcccagcaaccacatggtggctcacaaccatccgtaatgagatctgac 440
Query: 241 gtcctcttctggtgtatctgaagacagctacagtgtacttaggtataataataaatcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcctcttctggtgtatctgaagacagctacagtgtacttaggtataataataaatcttt 500
Query: 301 aaaaaagtaaaaaaaaatttttttaattaaaaaaaaaaagacctctgtgcacatagatac 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 aaaaaagtaaaaaaaaatttttttaattaaaaaaaaaa-gacctctgtgcacatagatac 559
Query: 361 cacacctcaagaaaacttctggtaaagagaaggcattcggattgatttatgta 413
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cacacctcaagaaaacttctggtaaagagaaggcattcggattgatttatgta 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_l22.g1 MSMg01no391_l22.g1 CHROMAT_FILE:
MSMg01no391_l22.g1 PHD_FILE: MSMg01no391_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:04 2005
(440 letters)
>mm_chr6_140492350_140493189
Length = 840
Score = 835 bits (432), Expect = 0.0
Identities = 438/440 (99%)
Strand = Plus / Minus
Query: 1 taggaggagaggtaaaggcagaagggtgaaggcctcatctcttcctaaaactcaactctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 taggaggagaggtaaaggcagaagggtgaaggcctcatctcttcctaaaactcaactctt 581
Query: 61 cccccagcttctgcctatcatttgttctgggccagaaaggatggctcttcaccaaaggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 cccccagcttctgcctatcatttgttctgggccagaaaggatggctcttcaccaaaggta 521
Query: 121 ggctatccacagaaacaagagacagaaatcacatctgatcaccatgagcaagatacagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ggctatccacagaaacaagagacagaaatcacatctgatcaccatgagcaagatacagta 461
Query: 181 atcaaagtatgaaacctaagcacactttaacccagcactgcaagtgaagccaacctgccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 atcaaagtatgaaacctaagcacactttaacccagcactgcaagtgaagccaacctgccc 401
Query: 241 agcacgtcagattaagcaggctgatgacgctacgtacttaccctctgggctcttcttcaa 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 agcacgtcagaggaagcaggctgatgacgctacgtacttaccctctgggctcttcttcaa 341
Query: 301 gaccccgtcctttctggactttaatccactgctctagctgttgcattgaattcgttctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gaccccgtcctttctggactttaatccactgctctagctgttgcattgaattcgttctct 281
Query: 361 gaatgactcggtcggcctctgtggctaggggccctgcatttgggtgactcccaccccgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gaatgactcggtcggcctctgtggctaggggccctgcatttgggtgactcccaccccgga 221
Query: 421 catctgccaagctgacattc 440
||||||||||||||||||||
Sbjct: 220 catctgccaagctgacattc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
