Query= MSMg01no392_a20.b1 MSMg01no392_a20.b1 CHROMAT_FILE:
MSMg01no392_a20.b1 PHD_FILE: MSMg01no392_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:27 2005
(480 letters)
>mm_chr6_49787943_49788822
Length = 880
Score = 832 bits (430), Expect = 0.0
Identities = 461/476 (96%), Gaps = 8/476 (1%)
Strand = Plus / Plus
Query: 5 gaattccttgtatacaggataaattttgagtcaaatattttatgcatgagttagtgtccc 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gaattccttgtaaacaggataaattttgagtcaaatattttatgcatgagttagtgtccc 272
Query: 65 taccactgcactgggcttcctgtctggctataggaggtggcctcttcagaattcatatcc 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 taccactgcactgggcttcctgtctggctataggaggtggcctcttcagaattca----- 327
Query: 125 ccagtactacgagtcatagctaaggacagctcattgatttctgggtgcctcctctatccc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ---gtactacgagtcatagctaaggacagctcattgatttctgggtgcctcctctatccc 384
Query: 185 cggtctctgtcacattcatctatacatctctatatcaacatctctacatgcttccctgtc 244
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 385 cggtctctgtcacattcatctgtacatctctatgtcaacatctctacatgcttccctgtc 444
Query: 245 ctacttcttctgtttttagttcctgaaatgctgctgaataaacctcacatggtatgttcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctacttcttctgtttttagttcctgaaatgctgctgaataaacctcacatggtatgttcc 504
Query: 305 aaatctttcaactgcccttcaatctcctacatattgatttatgctatgtactggctggtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaatctttcaactgcccttcaatctcctacatattgatttatgctatgtactggctggtt 564
Query: 365 ttgtgtcaatttgatacagtctcagttgaggaaatgcctccaacatgaaacggagctgta 424
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 565 ttgtgtcaatttgatacagtctcagttgaggaaatgcctccaacatgaaatggagctgta 624
Query: 425 aagcattttctcaattacagatcaatggaagagagcccagcccattatgggtggtg 480
||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||
Sbjct: 625 aagcattttctcaattagagatcaatggaagagggcccagcccattatgggcggtg 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_a20.g1 MSMg01no392_a20.g1 CHROMAT_FILE:
MSMg01no392_a20.g1 PHD_FILE: MSMg01no392_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:27 2005
(327 letters)
>mm_chr6_49985207_49985934
Length = 728
Score = 586 bits (303), Expect = e-172
Identities = 321/327 (98%), Gaps = 1/327 (0%)
Strand = Plus / Minus
Query: 1 agaactaggtcatacttataaaactatcgggactggattttgtcttttcttttcccttta 60
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 527 agaactaggtcataattataaaactatcaggactggattttgtcttttcttttcccttta 468
Query: 61 aaggaacccgggacagattccagacaggtctataatgatgctgcctcttct-tttgcatt 119
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 467 aaggaacccgggacagattccagacaggtctataatgatgctgcctcttctctttgcatt 408
Query: 120 ctgctgtgattgattttgatggttactgatatgctgtaatagttgtgattgctgatgact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ctgctgtgattgattttgatggttactgatatgctgtaatagttgtgattgctgatgact 348
Query: 180 gtgcaacttatgatgatagctatttccgtttattttttaattttacccatgaatacattt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gtgcaacttatgatgatagctatttccgtttattttttaattttacccatgaatacattt 288
Query: 240 tttaaattgctagaaggcaagggtagatgaaaggcatggcatatgtaaaacacatctatg 299
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tttaaaaagctagaaggcaagggtagatgaaaggcatggcatatgtaaaacacatctatg 228
Query: 300 tggcatttcaagagagcaagaatgaag 326
||| |||||||||||||||||||||||
Sbjct: 227 tggtatttcaagagagcaagaatgaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 728
Length adjustment: 9
Effective length of query: 318
Effective length of database: 719
Effective search space: 228642
Effective search space used: 228642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
