Query= MSMg01no392_h17.b1 MSMg01no392_h17.b1 CHROMAT_FILE:
MSMg01no392_h17.b1 PHD_FILE: MSMg01no392_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:01 2005
(384 letters)
>mm_chr6_16748537_16749320
Length = 784
Score = 675 bits (349), Expect = 0.0
Identities = 376/385 (97%), Gaps = 2/385 (0%)
Strand = Plus / Plus
Query: 1 taccgaggagtattctaactcctaacttaaatgagcattagcttagcaggacaacgagat 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 201 taccgaggagtattctaactcctaacttaaatgagtattagcttagcaggacaacgaaat 260
Query: 61 ccaaaaccatgtgggttaagaaagctttgcagactaggagaacaggagaagggagcc-gg 119
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 261 ccaaaaccatgtgggttaagaaagctttgcagactaggagaacaggagaaaggagccagg 320
Query: 120 gaagccagagttgcagtgttaaggcagcgctggatttggtcgctgctctgagagaaaatg 179
|| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ga-gccagagtttcagtgttaaggcagcgctggatttggtcgctgctctgagagaaaatg 379
Query: 180 gctgtagttgcttaccataccaactctggcttctttaccatgatgatggaggatgcaatc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gctgtagttgcttaccataccaactctggcttctttaccatgatgatggaggatgcaatc 439
Query: 240 agcacagtataccttgttgaagctttacaaatgttctggtctgttgtacactccagtgtt 299
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agcacagtataccttggggaagctttacaaatgttctggtctgttgtacactccagtgtt 499
Query: 300 tgctagaaagaggagtcaattctgtttctccagagactgatacactagctatcccgttgc 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 500 tgctagaaagaggagtcaattctgtttctccagagactgatacactagctatccagttgc 559
Query: 360 aatactgggatgctcgagacttgag 384
|||||||||||||||||||||||||
Sbjct: 560 aatactgggatgctcgagacttgag 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_h17.g1 MSMg01no392_h17.g1 CHROMAT_FILE:
MSMg01no392_h17.g1 PHD_FILE: MSMg01no392_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:01 2005
(244 letters)
>mm_chr6_16934128_16934771
Length = 644
Score = 398 bits (206), Expect = e-115
Identities = 238/256 (92%), Gaps = 12/256 (4%)
Strand = Plus / Minus
Query: 1 acagactagctagtgtcggggtaagagaagagaatgctagcaatctgtgtttagtgtggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acagactagctagtgtcggggtaagagaagagaatgctagcaatctgtgtttagtgtggc 502
Query: 61 atcaatgaagtgacaggga------------acacacacacacacacatacactcactca 108
||||||||||||||||||| ||||||||||||||||| |||| ||||||
Sbjct: 501 atcaatgaagtgacagggaacacacacacacacacacacacacacacacacacacactca 442
Query: 109 atgcaaatgcgtgatttcagaggagagttgtgtgtcaggttaacgtgtctgtgaggtgac 168
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atacaaatgtgtgatttcagaggagagttgtgtgtcaggttaacgtgtctgtgaggtgac 382
Query: 169 agggatactgtgctacagactggaaggcaggagaaactaagtcagtagcttcctgcctgt 228
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 381 agggatactgtgctacagactggaaggcaggggaaactaaatcagtagcttcctgcctgt 322
Query: 229 gatgctggaaagaact 244
||||||||||||||||
Sbjct: 321 gatgctggaaagaact 306
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
