Query= MSMg01no393_e11.b1 MSMg01no393_e11.b1 CHROMAT_FILE:
MSMg01no393_e11.b1 PHD_FILE: MSMg01no393_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:09 2005
(552 letters)
>mm_chr6_139058508_139059461
Length = 954
Score = 801 bits (414), Expect = 0.0
Identities = 436/446 (97%), Gaps = 7/446 (1%)
Strand = Plus / Minus
Query: 110 ttaatttcaaataattagctactcattcaccaacataaccagtgggtaccagtaccacac 169
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 ttaatttcaaataatcagctactcattcaccaacataaccagtgggtaccagtaccacac 895
Query: 170 aaaacaatatgcgcttagcattttctatcacaatctatatcagtaatgtctttattttta 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 aaaacaatatgcgcttagcattttctatcacaatctatatcagtaatgtctttattttta 835
Query: 230 ttttattttattttattttttattatgtcttaatcaatgattcatatttttgttgtcaca 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 ttttattttattttattttttattatgtcttaatcaatgattcatatttttgttgtcaca 775
Query: 290 caatggcatatatacatagagagagagagagaaagagagacagacagacagacgtgacta 349
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 774 caatggcatatatacatagagagagagagagaaagag----agacagacagacgtgacta 719
Query: 350 aatctgaaattagaacctttaaaataagaaaaagcaataaagaaaataatttaatttgaa 409
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 aacctgaaattagaacctttaaaataagaaaaagcaataaagaaaataatttaatttgaa 659
Query: 410 aagatgaataagaagaccacaaggtataaaattttacagtggcacacccttgaaggtgct 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 aagatgaataagaagaccacaaggtataaaattttacagtggcacacccttgaaggtgct 599
Query: 470 tgttaggtatgcaaaaacctatcaga--gtggaagtaaatgtttttttacattatatatg 527
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 598 tgttaggtatgcaaaaacctatcagagtgtggaagtaaatgtttttttacattatatgtg 539
Query: 528 tgtgtgtgtgtgtgtgtgtgt-gtgt 552
||||||||||||||||||||| ||||
Sbjct: 538 tgtgtgtgtgtgtgtgtgtgtagtgt 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 954
Length adjustment: 10
Effective length of query: 542
Effective length of database: 944
Effective search space: 511648
Effective search space used: 511648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_e11.g1 MSMg01no393_e11.g1 CHROMAT_FILE:
MSMg01no393_e11.g1 PHD_FILE: MSMg01no393_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:09 2005
(119 letters)
>mm_chr6_138893518_138894036
Length = 519
Score = 223 bits (115), Expect = 4e-63
Identities = 118/119 (99%)
Strand = Plus / Plus
Query: 1 cattgatcttaatgatatgatatggtgataaccaaaatgtgtctcagaaaacctgtgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattgatcttaatgatatgatatggtgataaccaaaatgtgtctcagaaaacctgtgtga 260
Query: 61 ctttcggtattctggacctgtcatgccagttatcagagttcttccttactcacttaatt 119
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 ctttcggtattctggacctgtcatgccagttatcagagttctcccttactcacttaatt 319
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 519
Length adjustment: 8
Effective length of query: 111
Effective length of database: 511
Effective search space: 56721
Effective search space used: 56721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
