Query= MSMg01no393_f09.b1 MSMg01no393_f09.b1 CHROMAT_FILE:
MSMg01no393_f09.b1 PHD_FILE: MSMg01no393_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:14 2005
(479 letters)
>mm_chr6_94886746_94887624
Length = 879
Score = 706 bits (365), Expect = 0.0
Identities = 380/385 (98%)
Strand = Plus / Minus
Query: 6 ggaattccattcctattcttctctgaagccatgtctacatattgtcaacagagctcttct 65
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ggaattccattcctattgttctctgaagccatgtctacatattgtcaacagagctcttct 329
Query: 66 atttaggtaaaataagcactggtttgctctcacttcctgccaaagggatctcttttaaat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atttaggtaaaataagcactggtttgctctcacttcctgccaaagggatctcttttaaat 269
Query: 126 ttatctcagaaaatccacttataagggggtctaatctacaaatgagaagataaattgttg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttatctcagaaaatccacttataagggggtctaatctacaaatgagaagataaattgttg 209
Query: 186 ggctggttaattttggttgtcagcttgccagaagtagaatcaccatggaaacacacctgt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ggctggttaattttggttgtcagcttgccagaagtagaatcaccatggaaacacacctgt 149
Query: 246 gggcatgtctctgagggagtttctggagaggttaactaggttggaaagacccaccctaaa 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gggcatgtctctgagggagtttctggagaggttaactaggttggaaagacccaccctaaa 89
Query: 306 catgagtggtgttgttccatgggctggggttctagactgaaggagaacacaataacgctc 365
||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 88 catgagtggtgttgttctatgggccggggttctagactgaaggagaacacaataaagctc 29
Query: 366 tagaggtcacatccttctgttctgg 390
|||||||||||||||||||| ||||
Sbjct: 28 tagaggtcacatccttctgtcctgg 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_f09.g1 MSMg01no393_f09.g1 CHROMAT_FILE:
MSMg01no393_f09.g1 PHD_FILE: MSMg01no393_f09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:14 2005
(459 letters)
>mm_chr6_94721202_94722059
Length = 858
Score = 714 bits (369), Expect = 0.0
Identities = 433/459 (94%), Gaps = 16/459 (3%)
Strand = Plus / Plus
Query: 1 aggccctaatggttggtctgctactcctggggcagtgcacgcacattaggattttgtgta 60
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 201 aggccctaatggttggtctgctaatcctggggcagtgcacgcaaattaggattttgtgta 260
Query: 61 ttctctctttcttgaagatccctctccctcacagtacttaacttcagttggtaactgtat 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 ttctctctttcttgaagatccctctccctcacagtactta-cttcagttggtaactgtat 319
Query: 121 ttttatctgagaatatgtttgaagttagcctttactgtattacgcacataaaagggataa 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 320 ttttatctgagaatatgtttgaagttagcttttactgtattacgcacataaaagggataa 379
Query: 181 tgtgtctctcatgtataagtgcatctgcgagtctagtgcacacttttacagggcagttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtgtctctcatgtataagtgcatctgcgagtctagtgcacacttttacagggcagttgt 439
Query: 241 gcaatacatacttgccgggtgagacacatttaatctcaatacattcagttagaaagactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcaatacatacttgccgggtgagacacatttaatctcaatacattcagttagaaagactc 499
Query: 301 aggtgaagttatctcataaaaaaaaccaaccaaccaaccaaccaaccaaccaaacaaaca 360
||||||||||||||||||||| ||| ||| || ||| || || || ||||| ||
Sbjct: 500 aggtgaagttatctcataaaacaaa--aacaaa--aac-aa--aa--aa---aacaacca 547
Query: 361 aacaaacaaacaaacaagaaaacccacatacattctttagggctgtgtgtagctttattt 420
| ||| |||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 accaaccaaacaaa-aa--aaacccacatacattctttagggctgtgtgtagctttattt 604
Query: 421 gtttgtgtccagggactctgtcaaattctatgatagaaa 459
||||||||||||| |||||||||||||||||| ||||||
Sbjct: 605 gtttgtgtccaggaactctgtcaaattctatgttagaaa 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 858
Length adjustment: 10
Effective length of query: 449
Effective length of database: 848
Effective search space: 380752
Effective search space used: 380752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
