Query= MSMg01no393_f24.b1 MSMg01no393_f24.b1 CHROMAT_FILE:
MSMg01no393_f24.b1 PHD_FILE: MSMg01no393_f24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:17 2005
(507 letters)
>mm_chr6_101550061_101550967
Length = 907
Score = 911 bits (471), Expect = 0.0
Identities = 495/503 (98%), Gaps = 1/503 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgatctttccaagacttttatcatgaatgggtgttggattttgtcaaatgctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcctgatctttccaagacttttatcatgaatgggtgttggattttgtcaaatgctt 265
Query: 65 tctcagcatctaatgagatgatcatgtggtttttgtctttgagtttgtttatatactgga 124
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 266 tctcagcatctaatgagatgatcatgtggtttt-gtctttgagtttgtttatatactgga 324
Query: 125 ttacattgatggatttctgcatattgaaccatccctgcatccctgggatgaaagctactt 184
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttacattgatggatttctgtatattgaaccatccctgcatccctgggatgaaagctactt 384
Query: 185 ggtcaggatagatgattgttttgatgtgttcttggattcggttagcaagaattttattga 244
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 385 ggtcaggatggatgattgttttgatgtgttcttggattcggttagcaagaactttattga 444
Query: 245 ggatttctgatggtcttaggtagtacctttgaaaggatcccttgactctcagaggggtca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggatttctgatggtcttaggtagtacctttgaaaggatcccttgactctcagaggggtca 504
Query: 305 tgacccacaggttaagaaccagtgttctaaggtttctgagtagcacaggtgaccatgtgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgacccacaggttaagaaccagtgttctaaggtttctgagtagcacaggtgaccatgtgg 564
Query: 365 gagaagtgggatggataaaagcctagcagagggcgattagtctggaagaaaggggagttt 424
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 565 gagaagtgggatggataagagcctagcagagggcgattaggctggaagaaaggggagttt 624
Query: 425 gcttttgagtagttcaggagcccgggccatgatataagagaggtaaactttgctgagtcc 484
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 625 gctttggagtagttcaggagccagggccatgatataagagaggtaaactttgctgagtcc 684
Query: 485 agtggaaaggctagctagttctt 507
|||||||||||||||||||||||
Sbjct: 685 agtggaaaggctagctagttctt 707
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_f24.g1 MSMg01no393_f24.g1 CHROMAT_FILE:
MSMg01no393_f24.g1 PHD_FILE: MSMg01no393_f24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:17 2005
(472 letters)
>mm_chr6_101717378_101718249
Length = 872
Score = 897 bits (464), Expect = 0.0
Identities = 470/472 (99%)
Strand = Plus / Minus
Query: 1 accatgatctcagacaggaactacacactgaaataacttcattctctgatttaacattag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 accatgatctcagacaggaactacacactgaaataacttcattctctgatttaacattag 613
Query: 61 tcctacccaatggctgatatattcagtgcaatgagaaaaaataattttgtttacttcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tcctacccaatggctgatatattcagtgcaatgagaaaaaataattttgtttacttcttt 553
Query: 121 ctgattcaaggctcttacattatttctgcaggattttttgtaccactctccgtattcgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ctgattcaaggctcttacattatttctgcaggattttttgtaccactctccgtattcgaa 493
Query: 181 atcttttatttctaaatatggctatgaagaactaagtacggctatcataggttcaagcaa 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atcttttatttctaaatatgactatgaagaactaagtacggctatcataggttcaagcaa 433
Query: 241 gcattcagactcatgaactcaccatgagtcatctgtagcttcaatattctgaataggtag 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 432 gcattcagactcatgaactcaccatgagtcatctgtatcttcaatattctgaataggtag 373
Query: 301 agatttgggatgcacagctcccagggtgggcagtaggaattcttttgatgtggaaacctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agatttgggatgcacagctcccagggtgggcagtaggaattcttttgatgtggaaacctt 313
Query: 361 tgcagaagcccatataacagttgtgattatgacaactctctcaaatagctaggtcacaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tgcagaagcccatataacagttgtgattatgacaactctctcaaatagctaggtcacaag 253
Query: 421 caagaagacaagacctattccacacagatataagagcagtccttgctctata 472
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 caagaagacaagacctattccacacagatataagagcagtccttgctctata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
