XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGTTTTC
ATTCCTTTATTGGAAAGTTTATGTTTTTGTTCAGTGAGGAAATCAGTCTT
AAGGTTTTCACTCAGTGTTGTGCCCTTATAGAGTTTTAGCGTCCTAGAAC
AGAGCTGGTAACATTCCTTTCCTTTCTGTTTTGTGGAGCAGTTTCAGAAT
TATTGGTGCTAACTCTTCCTTAAACATTTTCTAGAATCTAGCAGTGAACC
CTTCTGATCCTGGGCTTTTCTTTATGGGGAGACTTTTAATCACTACTTCA
ATCTCATTTCTTGTTATGAGTCTGTTTAAATTACCAGTGTGCTTGGTGGT
AGGAGTCTCAGCTATGATGCTAGAGACAGCTATAGAGAAAAAAAAAAGAC
CTACACTTTCTTCCTCGCCATACAAAGTTGATCATGAAAGAAACAGACAG
CTTCCAGAGTAGAACCTAATGTCTGCCTGGGGAGAAAAAGAAAAAAAAAT
AATGCTTTTATTTAACAAGTGATTATAGTGTAGCATATTAGACTCAATAG
CTAGACGCTGGCAAAGTATTAAGGGGACAGGAATAAAAACGTTGAAAGCT
CTTGAAATAGTGTTAAACACTTAACTATTTACTACCATCTGAAGTGAAAA
TAACCCAGCACGACGGATACAAATTGAATACTTTTGTATACAGATACCAA
AGTTGAGTAATCCTGGGTTATGGTTTGTTGGTGCATAAGGCTGCCTGGCC
ATTATCTGGGTCCCCACCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTG
AAAAAATGCTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAAC
CCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAG
GTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCAT
TGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAGATCAGTCTGGCG
GTTCCTCAGAAAACTGGATATAGTACTACCGGAGGATCCAGCAATACCTC
TCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACAGATGC
TCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAGGA
ACCCAGATGCCCCTCAGCAGAGGAATGGATACAGAAGATGTGGTACATCT
ACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTC
CTGGGCGAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTACACAT
TCACAAAGGAACTCACACTATATGTACTTCCTGATAAGNGGATATTANCC
CAAAACTAAGAATACCCACAAATAAGATACNATTTTTCTTAAAACCTGGA
ATCTAGAAAAAAGCGAACTGAAGTGGGGAACACAATGCCCCTCCTTTAAA
AAGGGGAGGAAAAAACCTTTGGATAGG

Query= MSMg01no393_i04.b1 MSMg01no393_i04.b1 CHROMAT_FILE:
MSMg01no393_i04.b1 PHD_FILE: MSMg01no393_i04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:28 2005
         (569 letters)



>mm_chr6_95016196_95017169
          Length = 974

 Score =  990 bits (512), Expect = 0.0
 Identities = 554/570 (97%), Gaps = 6/570 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagttttcattc-ctttattggaaagtttatgtttttgttcagtgaggaaatcag 63
           |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcagttttcaataactttattggaaagtttatgtttttgttcagtgaggaaatcag 263

                                                                       
Query: 64  tcttaaggttttcactcagtgttgtgcccttatagagttttagcgtcctagaacagagct 123
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 264 tcttaaggttttcactcagtgttgtgcccttatagagttttagcgtcctagagcagagct 323

                                                                       
Query: 124 ggtaacattcctttcctttctgttttgtggagcagtttcagaattattggtgctaactct 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggtaacattcctttcctttctgttttgtggagcagtttcagaattattggtgctaactct 383

                                                                       
Query: 184 tccttaaacattttctagaatctagcagtgaacccttctgatcctgggcttttctttatg 243
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tccttaaacattttgtagaatctagcagtgaacccttctgatcctgggcttttctttatg 443

                                                                       
Query: 244 gggagacttttaatcactacttcaatctcatttcttgttatgagtctgtttaaattacca 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gggagacttttaatcactacttcaatctcatttcttgttatgagtctgtttaaattacca 503

                                                                       
Query: 304 gtgtgcttggtggtaggagtctcagctatgatgctagagacagctatagagaaaaaaaaa 363
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtgtgtttggtggtaggagtctcagctatgatgctagagacagctatagagaaaaaaaaa 563

                                                                       
Query: 364 a--gacctacactttcttcctcgccatacaaagttgatcatgaaagaaacagacagcttc 421
           |  |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 564 aaagacctacattttcttcctcgccatataaagttgatcatgaaagaaacagacagcttc 623

                                                                       
Query: 422 cagagtagaa---cctaatgtctgcctggggagaaaaagaaaaaaaaataatgcttttat 478
           ||||||||||   |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 624 cagagtagaagaacctaatgtctacctggggagaaaaagaaaaaaaaataatgcttttat 683

                                                                       
Query: 479 ttaacaagtgattatagtgtagcatattagactcaatagctagacgctggcaaagtatta 538
           |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 684 ttaacaagtgattatagtgtagtatattagactcaatagctagacactggcaaagtatta 743

                                         
Query: 539 aggggacaggaataaaaacgttgaaagctc 568
           ||||||||||||||||||||||||||||||
Sbjct: 744 aggggacaggaataaaaacgttgaaagctc 773


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 974
Length adjustment: 10
Effective length of query: 559
Effective length of database: 964
Effective search space:   538876
Effective search space used:   538876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)