Query= MSMg01no393_i19.b1 MSMg01no393_i19.b1 CHROMAT_FILE:
MSMg01no393_i19.b1 PHD_FILE: MSMg01no393_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:31 2005
(424 letters)
>mm_chr6_77663385_77664205
Length = 821
Score = 706 bits (365), Expect = 0.0
Identities = 404/421 (95%), Gaps = 9/421 (2%)
Strand = Plus / Plus
Query: 7 gaattctttctgtatatcatgaaatttaaatataagaaaaccagagcaata---tttttt 63
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 207 gaattctttctgtaaatcatgaaatttaaatataagaaaaccagagcaatattttttttt 266
Query: 64 ttctgggaatatgagcttcacttgaataatgtttaagttttccatttaaacaaaagagat 123
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttctgggaagatgagcttcacttgaataatgtttaagttttccatttaaacaaaag---- 322
Query: 124 aagataactctgatcatcgttagaggaacaccctggcaggcttctgttgacttaaacacc 183
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 -agataactctgatcatcattagaggaacaccctggcaggcttctgttgacttaaacacc 381
Query: 184 acattccactgcatgtccccacccttccctgggatgtcaacctagtactcttaagcaagt 243
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 382 acattccactgcatgtctccacccttccctgggatttcaacctagtactcttaagcaagt 441
Query: 244 tctcttctcactttcctcaatttcttttttatgggaagagggccaatgattaaaagccca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tctcttctcactttcctcaatttcttttttatgggaagagggccaatgattaaaagccca 501
Query: 304 tatctcccccattctaatgctaatattgtgaactgacaatgcttttcactttttatatat 363
| ||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 502 tctctccac-attctaatgctaataatgtgaactgacaatgcttttcactttttatatat 560
Query: 364 tgtgttttgaactttattgcttgaaaacagcatccaatattcttaataggaatttggtca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtgttttgaactttattgcttgaaaacagcatccaatattcttaataggaatttggtca 620
Query: 424 a 424
|
Sbjct: 621 a 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 821
Length adjustment: 9
Effective length of query: 415
Effective length of database: 812
Effective search space: 336980
Effective search space used: 336980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_i19.g1 MSMg01no393_i19.g1 CHROMAT_FILE:
MSMg01no393_i19.g1 PHD_FILE: MSMg01no393_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:31 2005
(320 letters)
>mm_chr6_77859599_77860318
Length = 720
Score = 501 bits (259), Expect = e-146
Identities = 295/317 (93%), Gaps = 16/317 (5%)
Strand = Plus / Minus
Query: 4 gtgtatgttcagcagtccttagaagcacaggcgttttctagttaccgtcagaaggagaca 63
|||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 550 gtgtatgttcagcagtccttagaagcacag----------------gtcataaggagaca 507
Query: 64 gtgggacataagagtgatgatcaagatgaggagggtaaagtactctacccacagcctctg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gtgggacataagagtgatgatcaagatgaggagggtaaagtactctacccacagcctctg 447
Query: 124 ccttgagtggtgaaggagctatgaggcagggaatgcaggtacctaacaagctggggttgg 183
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 446 ccttgagtggtgaaggagctgtgagacagggaatgcaggtacctaacaagctggggttgg 387
Query: 184 tcctcagctaagcaaggtgtgcagatagccctgtgtcctgctctgaattcagccagcaaa 243
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 386 tcctcagctaagcaaggtgtgcagatagccctgtgacctgctctgaattcagccagcaaa 327
Query: 244 cccagcaagatatgattatgcctttccactgttgggtccaaaaggaaatacaactccgag 303
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cccagcaagacaggattatgcctttccactgttgggtccaaaaggaaatacaactccgag 267
Query: 304 gctacttgggcttggac 320
|||||||||||||||||
Sbjct: 266 gctacttgggcttggac 250
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
