XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTATCAGACCTTCAACGAAGACCTAATTCCAGTTCTTCACAAACTATTCC
ACAAAATAGAAACGGAAGGTACTCTACCCAACTCATTTTATGAAGCCACA
ATTACTCTGATACCTAAACCACAAAAAGACCCAACAAAGATAGAGAACTT
CAGACCAATTTCCCTTATGAATATCGATGCAAAAATCCTCAATAAAGTTC
TTGCTAAACGCATCCAAGAACACATCAAAACAATCATCCATCCTGACCAA
GTAGGTTTCATCCCAGGGATGCAGGGATGGTTCAATATACGGAAATCCAT
CAATGTAATCCAGTATATAAACAAACTCAAAGACAAAAACCACATGATTA
TCTCGTTAAATGCTGAGAAAGCCTTCGACAAAATCCAACACCCATTCATG
ATAAAAGTCTTGGAAAGATCAGGAATTCAAGGCCCATACCTAAACATGAT
AAAAGCAATCTACAGCAAACCAATAGCCAACATCAAAGTAAATGGTGAGA
AGCTGGAAGCAATCCCACTAAAATCAGGGACTAGAACAGGCTGTCCACTC
TCGCCCTACCTATTCCACATTGTACTTTAAGTCCTAACCAGAGCCATTTA
GACACAAAAGGAGATCCCGGGGAAACAATATGGAAGGGAAGAAACAAAAA
CACCTTTTTGCGAAGGAATGAAAGGAAATTTAAGGGACCCCAAAATCCCC
CCCAAAACTCCTAAGCCGGAAAAAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCATAGAAGAAAAAGTAAAGGTTTCATGTTGA
TTCCACTGGCATGTAAAATGGCCAGCCATCATATACTTTCTGAGTTTTCT
CCTGTTGGGGCTTGTGTCCTCTAGGACCCTGTGGAACATTCCAGACACAC
ATCCACATACTGGCTCTTTAGGAATCATTCAACCAAATGCCAGACACATT
CTATAGCTCCATCAAAATGAGGCAACAAAGTAATAAAATTGTTAAAAAAC
TACTTAAATGACACAGTCAGGATTTTTCTCCAGGTCTTTATGTTACTTGG
ATTTATTTTTAATGGAGTTATATTTCTATTTAAAGCAACATTTCATAAGA
TAAATGCATGTGCTCTAACTACCACAGTTGAGAAACCAGCCATGCCTCAT
GTAACAATGCATCAAATGCAAAACAGTTATGCTTTTAATCCTTGCCCAAC
TGAATTTCTATTGCAGATGTCTGTTCTCTCTTGAAAATAACACTGGATGG
ACTAAAATGTGGGTCAATTTGTAAGGGGGTTGCTTCCCCTGTGAAAACCC
AGGTTCCATTGTCCTAACACATAAAATGGGGATGGAAGGTCCCCTTATTT
TATTAAACCGGTGGGGGGGAAAAGGATAATTAAATTCTAATTTCCGGTTT
CTTTTTTTGGCATTGTGGACAAAGACACCTGGTCCTTTTGTTCCTTGTAT
TACTCACATAAAAATATAAT

Query= MSMg01no393_j24.g1 MSMg01no393_j24.g1 CHROMAT_FILE:
MSMg01no393_j24.g1 PHD_FILE: MSMg01no393_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:38 2005
         (418 letters)



>mm_chr6_103522072_103522888
          Length = 817

 Score =  775 bits (401), Expect = 0.0
 Identities = 410/413 (99%), Gaps = 1/413 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   agaagaaaaagtaaaggtttcatgttgattccactggcatgtaaaatggccagccatcat 63
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 615 agaagaaaaagtaaaggtttcatgttgattccactggcctgtaaaatggccagccatcat 556

                                                                       
Query: 64  atactttctgagttttctcctgttggggcttgtgtcctctaggaccctgtggaacattcc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 atactttctgagttttctcctgttggggcttgtgtcctctaggaccctgtggaacattcc 496

                                                                       
Query: 124 agacacacatccacatactggctctttaggaatcattcaaccaaatgccagacacattct 183
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 495 agacacacatccacatactgtctctttaggaatcattcaaccaaatgccagacacattct 436

                                                                       
Query: 184 atagctccatcaaaatgaggcaacaaagtaataaaattgttaaaaaactacttaaatgac 243
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 435 atagctccatcaaaatgaggcaacaaagtaataaaattgtt-aaaaactacttaaatgac 377

                                                                       
Query: 244 acagtcaggatttttctccaggtctttatgttacttggatttatttttaatggagttata 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 acagtcaggatttttctccaggtctttatgttacttggatttatttttaatggagttata 317

                                                                       
Query: 304 tttctatttaaagcaacatttcataagataaatgcatgtgctctaactaccacagttgag 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tttctatttaaagcaacatttcataagataaatgcatgtgctctaactaccacagttgag 257

                                                                
Query: 364 aaaccagccatgcctcatgtaacaatgcatcaaatgcaaaacagttatgcttt 416
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aaaccagccatgcctcatgtaacaatgcatcaaatgcaaaacagttatgcttt 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 817
Length adjustment: 9
Effective length of query: 409
Effective length of database: 808
Effective search space:   330472
Effective search space used:   330472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)