Query= MSMg01no394_b20.b1 MSMg01no394_b20.b1 CHROMAT_FILE:
MSMg01no394_b20.b1 PHD_FILE: MSMg01no394_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:22 2005
(476 letters)
>mm_chr6_36751893_36752768
Length = 876
Score = 866 bits (448), Expect = 0.0
Identities = 466/472 (98%), Gaps = 2/472 (0%)
Strand = Plus / Plus
Query: 5 gaattcagcaaagtccacattctcagcatatgaggcaggctattttaaaaacattgttct 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagcaaagtccaaattctcagcatatgaggcaggctattttaaaaacattgttct 264
Query: 65 aaatctttgcataatttccatttgttttatctgaaaagattttatctgtttcctgggatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaatctttgcataatttccatttgttttatctgaaaagattttatctgtttcctgggatt 324
Query: 125 atcaccaaattatattcactattgatttaaatctggattgcctttttctggacatcctaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atcaccaaattatattcactattgatttaaatctggattgcctttttctggacatcctaa 384
Query: 185 agttttttaggatgccacacagaaagacaatctctgcctttcttttattctctgccttta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agttttttaggatgccacacagaaagacaatctctgcctttcttttattctctgccttta 444
Query: 245 ttttatacaaagaagaga-acaggagaatagtgtagtagatgtcataatacagataagaa 303
||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||||
Sbjct: 445 ttttatacacagaagagaga-aggagaatggtgtagtagatgtcataatacagataagaa 503
Query: 304 taacactaagaaaatctgctattatatatactttcaataccaagggcaaaatctaccaag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taacactaagaaaatctgctattatatatactttcaataccaagggcaaaatctaccaag 563
Query: 364 catctttagtaaattttaaaggaaaatttaggagacaagatttgggatccctttctttct 423
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 564 catctttagtaaattttaaaggaaaatttaggagacaacatttgggatccctttctttct 623
Query: 424 caagtgaatccttgtgcatgaagccaggctacttggactataacaggccaag 475
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caagtgaatccttgtgcatgaagccaggctacttggactataacaggccaag 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_b20.g1 MSMg01no394_b20.g1 CHROMAT_FILE:
MSMg01no394_b20.g1 PHD_FILE: MSMg01no394_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:22 2005
(352 letters)
>mm_chr6_36938915_36939666
Length = 752
Score = 665 bits (344), Expect = 0.0
Identities = 350/352 (99%)
Strand = Plus / Minus
Query: 1 ttccattggacagcaaggccatactgtgtctctagcataagacctgggcatggtctgccc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 552 ttccattggacagcaaggccatactgtgtctctagcataagacctgggcacggtctgccc 493
Query: 61 tctgtcattcacgtagacacagactggagagagacccttgcatagaaacaaagtgaagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tctgtcattcacgtagacacagactggagagagacccttgcatagaaacaaagtgaagct 433
Query: 121 cctttcggaatcccttcctcttgaaagtcactcctctctttagtcctcaaccagagaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cctttcggaatcccttcctcttgaaagtcactcctctctttagtcctcaaccagagaatt 373
Query: 181 attcctaactttagttattccctatgatccacgtctccttctatgacagaaagagaagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 attcctaactttagttattccctatgatccacgtctccttctatgacagaaagagaagca 313
Query: 241 aagacggttgattgcaccctctggacatcgcagttcctgagaatagaaaggagattgtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aagacggttgattgcaccctctggacatcgcagttcctgagaatagaaaggagattgtgt 253
Query: 301 ttttggtgttagtaatcttagctgtcacaggatctttgccatgctggctacc 352
|||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 252 ttttggtgttagtaatcttagctgtcacaggacctttgccatgctggctacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
