Query= MSMg01no394_i20.b1 MSMg01no394_i20.b1 CHROMAT_FILE:
MSMg01no394_i20.b1 PHD_FILE: MSMg01no394_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:58 2005
(455 letters)
>mm_chr6_89193990_89194844
Length = 855
Score = 801 bits (414), Expect = 0.0
Identities = 438/446 (98%), Gaps = 2/446 (0%)
Strand = Plus / Minus
Query: 11 tcaagttgatattcacccaggtcatacttggaggtcacttattattcatacatgcctgca 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tcaagttgatattcacccaggtcatacttggaggtcacttattattcatacatgcctgca 596
Query: 71 cctggcaaagaatcatggagaaccatttgttctcatgaggttcataaggcaagaatcccc 130
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 595 cctggcaaagaatcatggagaaccattagttctcatgaggttcataaggcaagaatcccc 536
Query: 131 acacaaggacccctgttccacacctccaggatcagccatgtcccatctgcgctggaggaa 190
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 535 acacaaggacccctgttccacacctccaggatcagccatgttccatctgcactggaggaa 476
Query: 191 tcaggaggctatgagtccagtattttaagtcccagccctggaagttagagcccacattca 250
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tcaggaggctatgagtccagcattttaagtcccagccctggaagttagagcccacattca 416
Query: 251 ggaagaagtggtggactatctgtaggtaggcagaactgaatcttgtgagctcagtacaga 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ggaagaagtggtggactatctgtaggtaggcagaactgaatcttgtgagctcagtacaga 356
Query: 311 ttcactgtgataaaccaggagaaagcagagcaggggaccgtgtgtaaaagggcacaggtc 370
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 355 ttcactgtgataaaccaggggaaagcagagcaggagaccgtgtgtaaaagggcacaggtc 296
Query: 371 tagaggctcagggatggagataagaacagaggtacaatggatgctagggggaggtggggc 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tagaggctcagggatggagataagaacagaggtacaatggatgctagggggaggtggggc 236
Query: 431 tcttagcact-catggatcctctgct 455
|||||||||| | |||||||||||||
Sbjct: 235 tcttagcacttc-tggatcctctgct 211
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_i20.g1 MSMg01no394_i20.g1 CHROMAT_FILE:
MSMg01no394_i20.g1 PHD_FILE: MSMg01no394_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:58 2005
(416 letters)
>mm_chr6_89054449_89055257
Length = 809
Score = 714 bits (369), Expect = 0.0
Identities = 402/415 (96%), Gaps = 7/415 (1%)
Strand = Plus / Plus
Query: 1 atcagctcgactgtccgtcattagtctccctactccaggcccaggggttacactaagtca 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcagctcgactgtccgtcgttagtctccctactccaggcccaggggttacactaagtca 260
Query: 61 ataaaggaggaaggtggttcacacaggatcatgaaatcagaaggcgtgctccctgcttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataaaggaggaaggtggttcacacaggatcatgaaatcagaaggcgtgctccctgcttgg 320
Query: 121 tgtctctacccccactccggcacgtgcttattgtgtcagcgaactcctagacgtctgctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtctctacccccactccggcacgtgcttattgtgtcagcgaactcctagacgtctgctc 380
Query: 181 tctgtgatgctcgagaagcagccctgtgtccacagtgagctgagtctgggtgtggagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgtgatgctcgagaagcagccctgtgtccacagtgagctgagtctgggtgtggagagg 440
Query: 241 tggtgcaagaggctctggaaagccacgtgggtcaaaaagctcttcacctgtgatgtacac 300
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 tggtgcaagaggcactggaaagccacgtgggtcaaaaagctcttcacctgtgatgtccac 500
Query: 301 tctgagtccccagacacgccttgaagctctcagtatgtgtgtgtgtgtgtgttctgtgtc 360
||||||||||||||||| |||||||||||||||| |||||||| | ||||| | |||
Sbjct: 501 tctgagtccccagacactccttgaagctctcagt--gtgtgtgt-tctgtgt-c---gtc 553
Query: 361 ttcctgtttcccctgtccctgactgaaagtggggtcagagaaactgccagcagga 415
||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 554 ttcctgtttcccctgtccctgactgaaagtggggtcagagaaactgccaacagga 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 809
Length adjustment: 9
Effective length of query: 407
Effective length of database: 800
Effective search space: 325600
Effective search space used: 325600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
