CCCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCGAAAGAGGACCGCG
GAANNCCAATATTTCCACTACAAAGCAGATAAACAAAAACAAACATACTT
TCAGGATAATTAAAAGCATTCAGAGACAATTTCCCATCAAAGAAATACAA
ATGGGGCTGGTGAGATGGCTCAGCAGGTAAGAGCACCCGACTGCTCTTCC
GAAGGTCTGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATC
CGTAACGAGATCTGACTCCCTCTTCTGGAGTGTCTGAAGACAGCCACAGT
GTACTTACATATAATAAATAATAAATCTTTAAAAAAAAAGAAATATAAAT
GGCCACTGGCAGATGTGTGTGAACATTCCACGTCAGAAATCATGGTGAAA
ATGTGAATCAAAACCACAGTGAGAGAACGAACACCTCACACCTATTAGGG
TGAGTACTAGACCAACAGTGACAGAGACAGAAACCAGGAAGTACCAGTCG
TAGGCAAGGATATAGTCATAAAGTCTGTGTGTAGTGGATATAATAGATCA
GGTACAACCAAAGTACAGAGATGCCGCAAATACTAGAAAACGGCTGTGGG
TGGCTCGGTGAGGATGGGTACTTGCTATGCAAGGATGAGGAGCTAAGTAC
AATTCCAGTGCCCACACTTTTAAAGGCTAGGTGTAGCTCCATGTGCACCT
ATAACTCCATTGCTGTTGGGGGTGGGGGGATAAAGACAGAATGATCCCTT
GAGACTGCTT

CGATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATTGTTACTTTAATGGTTGCTTGTAA
AAGTTACAGTTCGTGGAAAATACTTCATTGAGAGGGCTTTTTGGGTGAAT
TTTATTGAGACAGGATCTTGGTAGCCCAGGCTGGTCCACACTCACAATCA
CCTGCATCAGCCTTCCAAGTGCTAAGGTTGCAGGTATGGTGCATCAGTAC
ATTCACTGTTGCTCTGACAACCATCACTTCCTTCTTCTTCTTCTTCTTCT
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTTTCTTCTTCTTCTTCTTCTTCTTTTCTTCT
TCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTTCTTCTTCTTCTTCTTCT
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTTCTTTTTTTCTTTTTGGCGCTGTA
GATTGGATCCAAGGCCTTGTGCATGCTAAGCCAATGGGCTGACATTTTCC
CCATCTCATTCATAAGCTTTACAGGCGGAAATACAAACCCCTTCGAAAGC
AGATAACACCCCCAGGGCTCCCTAGCTTTCTGGATAGCTTTCTCCCAAAT
TCTACATTTGCTTCATGGGTATACCCTCACATGTATCCGCATGTATTGTT
TTTT

Query= MSMg01no395_d14.b1 MSMg01no395_d14.b1 CHROMAT_FILE:
MSMg01no395_d14.b1 PHD_FILE: MSMg01no395_d14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:00 2005
         (557 letters)



>mm_chr6_108510592_108511548
          Length = 957

 Score =  986 bits (510), Expect = 0.0
 Identities = 548/564 (97%), Gaps = 8/564 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcagataaacaaaaacaaacatactttcaggata-attaaaagcattcagagacaattt 59
           ||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||
Sbjct: 195 agcagataaacaaaaacaaacatactttcaggataga-caaaagcattcagagacaattt 253

                                                                       
Query: 60  cccatcaaagaaatacaaatggggctggtgagatggctcagcaggtaagagcacccgact 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cccatcaaagaaatacaaatggggctggtgagatggctcagcaggtaagagcacccgact 313

                                                                       
Query: 120 gctcttccgaaggtctggagttcaaatcccagcaaccacatggtggctcacaaccatccg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gctcttccgaaggtctggagttcaaatcccagcaaccacatggtggctcacaaccatccg 373

                                                                       
Query: 180 taacgagatctgactccctcttctggagtgtctgaagacagccacagtgtacttacatat 239
           ||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 374 taatgagatctgactccctcttctgaagtgtctgaagacagctacagtgtacttacatat 433

                                                                       
Query: 240 aataaataataaatcttt------aaaaaaaaagaaatataaatggccactggcagatgt 293
           ||||||||||||||||||      ||||||||||||||| ||||||||||||||||||||
Sbjct: 434 aataaataataaatcttttaaaaaaaaaaaaaagaaatacaaatggccactggcagatgt 493

                                                                       
Query: 294 gtgtgaacattccacgtcagaaatcatggtgaaaatgtgaatcaaaaccacagtgagaga 353
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gtgtgaacattccacgtcagaaatcatggtgaaaatgtgaatcaaaaccacagtgagaga 553

                                                                       
Query: 354 acgaacacctcacacctattagggtgagtactagaccaacagtgacagagacagaaacca 413
           ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 554 acgaacacctcacacctattagggtaagtactagaccaacaatgacagagacagaaacca 613

                                                                       
Query: 414 ggaagtaccagtcgtaggcaaggatatagtcataaagtctgtgtgtagtggatataatag 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ggaagtaccagtcgtaggcaaggatatagtcataaagtctgtgtgtagtggatataatag 673

                                                                       
Query: 474 atcaggtacaaccaaagtacagagatgccgcaaatactagaaaacggctgtgggtggctc 533
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 674 atcaggtacaaccaaagtacagagatgccgcaaatactagaaaatggctgtgggtggctc 733

                                   
Query: 534 ggtgaggatgggtacttgctatgc 557
           ||||||||||||||||||||||||
Sbjct: 734 ggtgaggatgggtacttgctatgc 757


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space:   518009
Effective search space used:   518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)