Query= MSMg01no395_k21.b1 MSMg01no395_k21.b1 CHROMAT_FILE:
MSMg01no395_k21.b1 PHD_FILE: MSMg01no395_k21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:36 2005
(452 letters)
>mm_chr6_16433770_16434622
Length = 853
Score = 830 bits (429), Expect = 0.0
Identities = 444/449 (98%), Gaps = 1/449 (0%)
Strand = Plus / Plus
Query: 5 gaattctcttgttctttccacggtagccgaacaaaactactcattaaaatatatgcttag 64
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcttgttctgtagacggtagccgaacaaaactactcattaaaatatatgcttag 264
Query: 65 gaaaagaaaattagcagcataaataaaatcagtggtaataaagagaatcaatcagcaaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaaaagaaaattagcagcataaataaaatcagtggtaataaagagaatcaatcagcaaga 324
Query: 125 aaaatgtacagcaatatacaacataaaattttaaagaagaatcagggtaatattgtatat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaatgtacagcaatatacaacataaaattttaaagaagaatcagggtaatattgtatat 384
Query: 185 aaaaggtgattaaatgttagcatatgattatactgtcattgcatattattatcaaagaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaaggtgattaaatgttagcatatgattatactgtcattgcatattattatcaaagaat 444
Query: 245 gtttaatttataccctgtttaaaattagaggtagatgagcataaagatattttttttt-c 303
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 445 gtttaatttataccctgtttaaaattagaggtagatgagcaaaaagatattttttttttc 504
Query: 304 ctccagaccatgttctttctcgtttctgctgaatccatgtataaatttgtgactggaatg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctccagaccatgttctttctcgtttctgctgaatccatgtataaatttgtgactggaatg 564
Query: 364 tgtggtcctgcattaattatattattattagaagtatattgattcttggcagaatgctaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgtggtcctgcattaattatattattattagaagtatattgattcttggcagaatgctaa 624
Query: 424 atagtgttaatagggaatgatgttctcag 452
|||||||||||||||||||||||||||||
Sbjct: 625 atagtgttaatagggaatgatgttctcag 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 853
Length adjustment: 10
Effective length of query: 442
Effective length of database: 843
Effective search space: 372606
Effective search space used: 372606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_k21.g1 MSMg01no395_k21.g1 CHROMAT_FILE:
MSMg01no395_k21.g1 PHD_FILE: MSMg01no395_k21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:36 2005
(407 letters)
>mm_chr6_16635463_16636269
Length = 807
Score = 764 bits (395), Expect = 0.0
Identities = 404/407 (99%)
Strand = Plus / Minus
Query: 1 ctaatacggaatgggaaaatgtatgttcttcaggccaatataaaatgtcttcactaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ctaatacggaatgggaaaatgtatgttcttcaggccaatataaaatgtcttcactaattc 548
Query: 61 agtgatgatggagcacaaatatcataagtaagaagagtgaagatactttagtaactttta 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 547 agtgatgatggagcacaaatatcatgagtaagaagagtgaagatactttagtaactttta 488
Query: 121 atgtacatttcaaaatgttgaaataaaaaaccaaaggtactcagaaaatcactattttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 atgtacatttcaaaatgttgaaataaaaaaccaaaggtactcagaaaatcactattttag 428
Query: 181 ttgatctgtaagcagagtggagtccactaaaacccatcaattctctatacttatcttatg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tttatctgtaagcagagtggagtccactaaaacccatcaattctctatacttatcttatg 368
Query: 241 tggtccaataaagttcagtatagtgaaagaacacacataaaaatctattactgggattcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tggtccaataaagttcagtatagtgaaagaacacacataaaaatctattactgggattcc 308
Query: 301 ccacagcacaatctaggtttcagttgttccaaattaataatagtttcataatatagtttt 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 307 ccacagcacaatctaggtttcagttgctccaaattaataatagtttcataatatagtttt 248
Query: 361 aaatataactaatattagcactgttaaagataaaacataccttgagt 407
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aaatataactaatattagcactgttaaagataaaacataccttgagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
