Query= MSMg01no398_e06.b1 MSMg01no398_e06.b1 CHROMAT_FILE:
MSMg01no398_e06.b1 PHD_FILE: MSMg01no398_e06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:57 2005
(503 letters)
>mm_chr6_31385651_31386553
Length = 903
Score = 584 bits (302), Expect = e-171
Identities = 322/334 (96%), Gaps = 9/334 (2%)
Strand = Plus / Minus
Query: 6 gaattccaaacattttcactgtacttacaccatttccaccaatcactcttccctccaact 65
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaattccaaacatgagcactgtacttacaccatttccaccaatcactcttccctccaact 266
Query: 66 ctatccatgccctccttactccttctcagtttcatgactttatcttaatcactgtcacac 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctatccatgccctccttactccttctcagtttcatgactttatcttaatcactgtcacac 206
Query: 126 aactgaaacttttatgcactattgtatggctataaaacagcaacactgaagaactaggag 185
||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 205 aactgaaacttttatgcactattgtatggctataaaacagcaacactga---------ag 155
Query: 186 tttaaaagttaaagcagacatacaatatgccacctggtggttctattcctaagtctctac 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tttaaaagttaaagcagacatacaatatgccacctggtggttctattcctaagtctctac 95
Query: 246 ctaaaaaagtcaaagtgtatttccatacaaagacttatatacaaatgttcatatcaacag 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 ctaaaaaagtcaaagtgtatttccatacaaagacttatatacaaatgttcatatcaacag 35
Query: 306 ttaatagcccacaagtgtgactagcccaaatgtc 339
||||||||||||||||||||||||||||||||||
Sbjct: 34 ttaatagcccacaagtgtgactagcccaaatgtc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_e06.g1 MSMg01no398_e06.g1 CHROMAT_FILE:
MSMg01no398_e06.g1 PHD_FILE: MSMg01no398_e06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:57 2005
(540 letters)
>mm_chr6_31237016_31237955
Length = 940
Score = 982 bits (508), Expect = 0.0
Identities = 532/540 (98%)
Strand = Plus / Plus
Query: 1 atcagtttggctagactggctgaccagtgagcccagggctccccccatctctgcctccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcagtttggctagactggctgaccagtgagcccagggctccccccatctctgcctccct 260
Query: 61 gccactgggattaaagatgcatgccatcatgcctgactttacaagggtacctggcatcca 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccactggggttaaagatgcatgccatcatgcctgactttacaagggtacctggcatcca 320
Query: 121 atcccaggtccagatgcctgcacagcaagcattccaccaactgagccacctccctaaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcccaggtccagatgcctgcacagcaagcattccaccaactgagccacctccctaaccc 380
Query: 181 atgctcctgctcagcttgtcaagatagggtctcaccctctagacctgattggtcctgaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 atgctcctgctcagcttgtcaagatagggtctcaccctctagacctgattggtcccgaac 440
Query: 241 ttgtttctgtattgaatttatagtcaggggccgctgtgtgatttttttttaaagtttctt 300
|||| | || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtggcagtgttgaatttatagtcaggggccgctgtgtgatttttttttaaagtttctt 500
Query: 301 gccagaaattcgtcactgttatcaaacttgtttcaataaagagtgtttagtataaagaac 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccagaaattcatcactgttatcaaacttgtttcaataaagagtgtttagtataaagaac 560
Query: 361 aaggatgtcaaaaacccttcattgcagtcctttccctggtgccaggggatggcagagcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggatgtcaaaaacccttcattgcagtcctttccctggtgccaggggatggcagagcac 620
Query: 421 agaactcatagataacacttgtttgttaagaacttcctgaaaggtgacaaacagaaacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaactcatagataacacttgtttgttaagaacttcctgaaaggtgacaaacagaaacca 680
Query: 481 aactttcagtcagacaaaaatcacatggcttaggtttgagaatattccttctgttccaaa 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aactttcagtcagacaaaaaccacatggcttaggtttgagaatattccttctgttccaaa 740
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 940
Length adjustment: 10
Effective length of query: 530
Effective length of database: 930
Effective search space: 492900
Effective search space used: 492900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
