Query= MSMg01no399_g24.b1 MSMg01no399_g24.b1 CHROMAT_FILE:
MSMg01no399_g24.b1 PHD_FILE: MSMg01no399_g24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:27 2005
(547 letters)
>mm_chr6_11599460_11600406
Length = 947
Score = 965 bits (499), Expect = 0.0
Identities = 534/551 (96%), Gaps = 11/551 (1%)
Strand = Plus / Plus
Query: 1 cgactcacctagatcctcagggactctcagagattgaaccaataaacaaaaagcatacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cgactcacctagatcctcagggactctcagagattgaaccaataaacaaaaagcatacat 261
Query: 61 tggctgaatttacccctcccccgtcccccgcctccacaaataaactcagtcttcatgtgg 120
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 262 tggctgaatttacccctcccccatcccccgcctccacaaataa-ctcagtcttcatgtgg 320
Query: 121 gtcccaaataactgcagtggggcccatccctaaatttgttgcttgtctatgtatcctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcccaaataactgcagtggggcccatccctaaatttgttgcttgtctatgtatcctgtt 380
Query: 181 cccctaactgggcctcagtgggagaaaatgcatgtatccctgaaaagacataatgttaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccctaactgggcctcagtgggagaaaatgcatgtatccctgaaaagacataatgttaca 440
Query: 241 gtgttg-----ttttttgcccagggagatcatccaccctcgcagcagagaagacaacaag 295
|||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgttggggaat-----gcccagggagatcatccaccctcgcagcagagaagacaacaag 495
Query: 296 gaaatgggaagaaggactgtttgaagtggattccaggacgggcagtgattgccatgcaaa 355
||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 496 gaaatgggaagaaggactgtttgaagtgggttccaggacgggcagtgattgggatgcaaa 555
Query: 356 gtgaatgaataagtaaataaattaaataaataaataataaataagcaaacaaataaagtc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gtgaatgaataagtaaataaattaaataaataaataataaataagcaaacaaataaagtc 615
Query: 416 accttctagagatgattttaattacagatcactgggatactctgaagttctgggggaagg 475
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 616 accttctagagatgattttaattacagatcactgggatactctgaagttctgtgggaagg 675
Query: 476 aaagaaaaatccatttatagccaaaacaagaatgtatataattcatcttacatgtcagca 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 676 aaagaaaaatccatttatagccaaaacaagaatgtatataattcatcttacatgtcagta 735
Query: 536 tctgatgtcgg 546
|||||||||||
Sbjct: 736 tctgatgtcgg 746
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_g24.g1 MSMg01no399_g24.g1 CHROMAT_FILE:
MSMg01no399_g24.g1 PHD_FILE: MSMg01no399_g24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:27 2005
(348 letters)
>mm_chr6_11757206_11757950
Length = 745
Score = 598 bits (309), Expect = e-175
Identities = 338/349 (96%), Gaps = 4/349 (1%)
Strand = Plus / Minus
Query: 1 agttactccaggaatccatgatgcatttaccctcttttcc-aacacgcttagattttact 59
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 690 agttactccaggaatccatgatgcatttaccctcttttccaaacacgcttagattttact 631
Query: 60 ggattaaaaaaaattcatctgcttctctttcttcctgtcagcccaccttcctctctttca 119
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 630 ggattaaaaaaaaatcatctgcttctctttcttcctgtcagcccaccgtcctctctttca 571
Query: 120 ctttctctctcttcctctcactttcatcattgactttctgtacctcaatttaattgcaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ctttctctctcttcctctcactttcatcattgactttctgtacctcaatttaattgcaat 511
Query: 180 atattaagcttcccagagccagtttccctgggccactatgaccaattgaaagacgatatt 239
||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 510 atattaaacttcccagagccagtttccgtgggccactatgaccaattgaaagatgatatt 451
Query: 240 ggaccacttcaatttagtcacaaactttttttttttttattgctccaatggagagttgat 299
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 450 ggaccacttcaatttagtcacaaac---ttttttttttagtgctccaatggagagttgat 394
Query: 300 tttatcattccgttttgctcaacattccactctgtttcatccttcccca 348
|||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 393 tttatcattccgttttgctcaacattccactctgtttcatcctttccca 345
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 745
Length adjustment: 9
Effective length of query: 339
Effective length of database: 736
Effective search space: 249504
Effective search space used: 249504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
