Query= MSMg01no400_k14.b1 MSMg01no400_k14.b1 CHROMAT_FILE:
MSMg01no400_k14.b1 PHD_FILE: MSMg01no400_k14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:03 2005
(246 letters)
>mm_chr6_126395180_126395824
Length = 645
Score = 455 bits (235), Expect = e-132
Identities = 241/243 (99%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 1 gatctatggaaaactcacaaagtgctttacatggagagaaggactctctctttgcccatc 60
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 201 gatctatggaaaactcacaaagtactttacatggagagaaggac-ctctctttgcccatc 259
Query: 61 tctatatgcctggccccatgcacacctgccttctcattctgtccctgtacaaactagatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tctatatgcctggccccatgcacacctgccttctcattctgtccctgtacaaactagatc 319
Query: 121 cctgggcctttgctgtccccttattctgtatttccctgcttgtgttatggaactcatccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cctgggcctttgctgtccccttattctgtatttccctgcttgtgttatggaactcatccc 379
Query: 181 cccatcgctgtgatccccacacaggggatgtgagtgtgtgagagctggttacattccaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cccatcgctgtgatccccacacaggggatgtgagtgtgtgagagctggttacattccaat 439
Query: 241 tta 243
|||
Sbjct: 440 tta 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 645
Length adjustment: 9
Effective length of query: 237
Effective length of database: 636
Effective search space: 150732
Effective search space used: 150732
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no400_k14.g1 MSMg01no400_k14.g1 CHROMAT_FILE:
MSMg01no400_k14.g1 PHD_FILE: MSMg01no400_k14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:03 2005
(180 letters)
>mm_chr6_126578844_126579423
Length = 580
Score = 340 bits (176), Expect = 2e-98
Identities = 179/180 (99%)
Strand = Plus / Minus
Query: 1 agaccacttgaaaggatttggagaaaaaacagagttctccaaatgcctgccgctgcattc 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 380 agaccacttgaaaggatttggagaaaaaacggagttctccaaatgcctgccgctgcattc 321
Query: 61 tgtcacatcacagttgtgttgggaatcttgacttgtagtataaagagccagcttctggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgtcacatcacagttgtgttgggaatcttgacttgtagtataaagagccagcttctggct 261
Query: 121 tagcaatgaatcctataaactgaaggatccctgagacatcaaactagccattttcagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tagcaatgaatcctataaactgaaggatccctgagacatcaaactagccattttcagaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 180
Length of database: 580
Length adjustment: 8
Effective length of query: 172
Effective length of database: 572
Effective search space: 98384
Effective search space used: 98384
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
