Query= MSMg01no401_e18.b1 MSMg01no401_e18.b1 CHROMAT_FILE:
MSMg01no401_e18.b1 PHD_FILE: MSMg01no401_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:53 2005
(502 letters)
>mm_chr6_101328838_101329739
Length = 902
Score = 932 bits (482), Expect = 0.0
Identities = 497/502 (99%)
Strand = Plus / Minus
Query: 1 actctcaccagggtttcttaggaatgtctacagccttgggaggtagtaaaacaaaaacaa 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 actctcaccagtgtttcttaggaatgtctacagccttgggaggtagtaaaacaaaaacaa 584
Query: 61 aaactaccaaaggcatgggtaatgttatgaactttctacttagactggtatcccacatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aaactaccaaaggcatgggtaatgttatgaactttctacttagactggtatcccacatta 524
Query: 121 tgaactttccacttagcctgctatcccccaagtggtgtttccacccagtgccaggcttgc 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tgaactttccacttagcctggtatcccccaagtggtgtttccacccagtgccaggcttgc 464
Query: 181 tactgggcttgaaaagcttctctggagtagaagagaaaggtccagacggcaagggttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tactgggcttgaaaagcttctctggagtagaagagaaaggtccagacggcaagggttttt 404
Query: 241 ccatcaagctattatccaggctgtgtagagaccagcagcttctccgtggctggtaggctc 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ccatcaagctaaaatccaggctgtgtagagaccagcagcttctccgtggctggtaggctc 344
Query: 301 ttttagcgcggatacacactcaagctcctggtgaaccattggttcacaatctgaaaggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ttttagcgcggatacacactcaagctcctggtgaaccattggttcacaatctgaaaggac 284
Query: 361 ccaaaattctcaaatagcctgtctttgattcagttcaaagagcgattctttgaactgctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ccaaaattctcaaatagcctgtctttgattcagttcaaagagcgattctttgaactgctc 224
Query: 421 cagtgggaaaatggagataaaacaataagcatataaataaataaataaataaataaataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 cagtgggaaaatggagataaaacaataagcatataaataaataaataaataaataaataa 164
Query: 481 ataaatttaaggaaaacaaaac 502
|| |||||||||||||||||||
Sbjct: 163 attaatttaaggaaaacaaaac 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no401_e18.g1 MSMg01no401_e18.g1 CHROMAT_FILE:
MSMg01no401_e18.g1 PHD_FILE: MSMg01no401_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:53 2005
(499 letters)
>mm_chr6_101146687_101147585
Length = 899
Score = 874 bits (452), Expect = 0.0
Identities = 488/500 (97%), Gaps = 2/500 (0%)
Strand = Plus / Plus
Query: 1 ttcctctgtgctatggttcgggtgcccaaagaataggtggaagaagggactttacttagc 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcctctgtgctatggtttgggtgcccaaagaataggtggaagaagggactttacttagc 260
Query: 61 tgacacaagggaagtgggtccgagaagtagtttgggctccctgaaaataaatctgcatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgacacaagggaagtgggtccgagaagtagtttgggctccctgaaaataaatctgcatgg 320
Query: 121 ttccttaagctgctgacaacatgcatttcaggtggaagtcatttatcagcaactcaccat 180
||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 321 ttccttaagctgctgacaacatgcacttcatgtggaagtcatttatcagcaactcaccaa 380
Query: 181 aggatacttcagacagaaatagccccacaaaattgtacctagttaaaaccaaactgaacc 240
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 atgatacttcagacagaaatagccccacaaaattttacctagttaaaaccaaactgaacc 440
Query: 241 ctgatttcntt-ttttgggactgtagtctgggcttaagagcataaataataaggttgaat 299
| |||| | || |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 cagattcc-ttcttttgggactgtagtctgcgcttaagagcataaataataaggttgaat 499
Query: 300 gaaaaataagttgacacagatttgttgtggatatcataaagttgactttgggaaggggct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaaaaataagttgacacagatttgttgtggatatcataaagttgactttgggaaggggct 559
Query: 360 cactctcatagatgtgtatgaagttcacctgaatggaagctacatggtagctttggtgcc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cactctcatagatgtgtatgaagttcacctgaatggaagctacatggtagctttggtgcc 619
Query: 420 aaaccaaaacaagaacagagttttgaaaactaccatttaacttactccctctgcagtagc 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 620 aaaccaaaacaagaacagagttttgaaaactaccatttaacttactccctctgcagcagc 679
Query: 480 caagcctaacctagcacact 499
||||||||||||||||||||
Sbjct: 680 caagcctaacctagcacact 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
