Query= MSMg01no401_p11.b1 MSMg01no401_p11.b1 CHROMAT_FILE:
MSMg01no401_p11.b1 PHD_FILE: MSMg01no401_p11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:43 2005
(193 letters)
>mm_chr6_105850631_105851223
Length = 593
Score = 337 bits (174), Expect = 4e-97
Identities = 189/194 (97%), Gaps = 2/194 (1%)
Strand = Plus / Plus
Query: 1 tcctataaaattaggggtgagctgaaatccatatgttacaaggaaaacaaattaaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctataaaattaggggtgagctgaaatccatatgttacaaggaaaacaaattaaagaag 260
Query: 61 tgtcaaaataaaggaggatcttggcaagaccttaccatagagttaggagacgctgttgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtcaaaataaaggaggatcttggcaagaccttaccatagagttaggagacgctgttgca 320
Query: 121 tatctcatattgtgtgttacaaaggatagaaa-catagattctaacactgcatagttttc 179
||||||| | |||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 321 tatctcaaaaagtgtgttacaaaggat-gaaaacatagattctaacactgcatagttttc 379
Query: 180 actcatattacaga 193
||||||||||||||
Sbjct: 380 actcatattacaga 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 593
Length adjustment: 8
Effective length of query: 185
Effective length of database: 585
Effective search space: 108225
Effective search space used: 108225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no401_p11.g1 MSMg01no401_p11.g1 CHROMAT_FILE:
MSMg01no401_p11.g1 PHD_FILE: MSMg01no401_p11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:43 2005
(263 letters)
>mm_chr6_106046232_106046893
Length = 662
Score = 470 bits (243), Expect = e-137
Identities = 258/263 (98%), Gaps = 1/263 (0%)
Strand = Plus / Minus
Query: 1 gaataagagatgttgcctataattgatgattcccaaatctatactcaatcatcagcaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gaataagagatgttgcctataattgatgattcccaaatctatactcaatcatcagcaata 403
Query: 61 aaaataaaaggacagaaatcattgtataaaatgaaaacaggcgcttcagctgacaagaca 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 402 aaaataaaaggacagaaatcattgtataaaatgaaaacaggcgtttcagctgacaagaca 343
Query: 121 tgtttaaccatgtaagtgtatgtgctctttatcatgacctctaatgtgacaaatcttggg 180
||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 342 tgtttaaccat-taagtgtatgtgttctttataatgacctctaatgtgacaaatcttggg 284
Query: 181 aataatgtacttcacatatacctggacaagcttcaactcattagttttggaaaagatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aataatgtacttcacatatacctggacaagcttcaactcattagttttggaaaagatttt 224
Query: 241 tattttctccccttattggagat 263
|||||||||||| ||||||||||
Sbjct: 223 tattttctccccatattggagat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 662
Length adjustment: 9
Effective length of query: 254
Effective length of database: 653
Effective search space: 165862
Effective search space used: 165862
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
