Query= MSMg01no402_d15.b1 MSMg01no402_d15.b1 CHROMAT_FILE:
MSMg01no402_d15.b1 PHD_FILE: MSMg01no402_d15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:03 2005
(290 letters)
>mm_chr6_91684706_91685396
Length = 691
Score = 547 bits (283), Expect = e-160
Identities = 289/291 (99%), Gaps = 1/291 (0%)
Strand = Plus / Plus
Query: 1 ggcttgcctcaaattcaaggcagtcctgtctgccttaacctccccagtgttggaatgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcttgcctcaaattcaaggcagtcctgtctgccttaacctccccagtgttggaatgaaa 260
Query: 61 atgagcactttgtagttcattttgtcatggtgccggtaacagaacccagggtcttgccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgagcactttgtagttcattttgtcatggtgccggtaacagaacccagggtcttgccca 320
Query: 121 tgctggcttagctgccaagtggcccccaacccctgacctct-gttctctttccctaaagg 179
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 tgctggcttagctgccaagtggcccccaacccctgacctcttgttctctttccctaaagg 380
Query: 180 cgcaatgtgctcagcctgtcctccggaatcgacaacccaggcagtctgaaatgggacctc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgcaatgtgctcagcctgtcctccggaatcgacaacccaggcagtctgaaatgggacctc 440
Query: 240 gcgctctgtctcctcttagtctggctcgtctgttttttctgcatctggaag 290
|||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcgctctgcctcctcttagtctggctcgtctgttttttctgcatctggaag 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 691
Length adjustment: 9
Effective length of query: 281
Effective length of database: 682
Effective search space: 191642
Effective search space used: 191642
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no402_d15.g1 MSMg01no402_d15.g1 CHROMAT_FILE:
MSMg01no402_d15.g1 PHD_FILE: MSMg01no402_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:03 2005
(186 letters)
>mm_chr6_91865105_91865691
Length = 587
Score = 323 bits (167), Expect = 4e-93
Identities = 182/187 (97%), Gaps = 1/187 (0%)
Strand = Plus / Minus
Query: 1 tctgatgtttcctgtgtaccctgtaggcatattgaata-tgtcttacatgcaaattatca 59
||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 387 tctgatgcttcctgtgtaccctgtatgcatattgaatattgtcttacatgcaaattatca 328
Query: 60 tgcactgtcagcagtggaatattccgttgtggtatcatatgggcactcaatagcctttag 119
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 327 tgcactgtcagcagtggaatattccgttttggtatcatatgggcactcaatagcctttag 268
Query: 120 accacagaatattttagattatgtatgctcaactcatacctgttggggtgcatgtggtat 179
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 acgacagaatattttagattatgtatgctcaactcatacctgttggggtgcatgtggtat 208
Query: 180 atacacg 186
|||||||
Sbjct: 207 atacacg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 186
Length of database: 587
Length adjustment: 8
Effective length of query: 178
Effective length of database: 579
Effective search space: 103062
Effective search space used: 103062
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
