Query= MSMg01no403_m07.b1 MSMg01no403_m07.b1 CHROMAT_FILE:
MSMg01no403_m07.b1 PHD_FILE: MSMg01no403_m07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:10 2005
(600 letters)
>mm_chr6_20240690_20241688
Length = 999
Score = 1073 bits (555), Expect = 0.0
Identities = 587/598 (98%), Gaps = 3/598 (0%)
Strand = Plus / Plus
Query: 1 atgttgttgccaaaaggtagaattttgttttgtttggctttgtttcccatgtaaaagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgttgttgccaaaaggtagaattttgttttgtttggctttgtttcccatgtaaaagatc 260
Query: 61 aaaagaaacacagtgaaacttacttattacaatgcctgaatatttttttattaaaatagt 120
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 aaaagaaacacagtgacacttacttattacaatgcctgaatatttttt-attaaaatagt 319
Query: 121 ggaatgatgaattaaagggaacagataaataattaaaaatgcacactttcaaagtgagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggaatgatgaattaaagggaacagataaataattaaaaatgcacactttcaaagtgagtc 379
Query: 181 agatgtgagtggcatcaatctacactaatgtttctaaaaacaataaaatgaaaaatattt 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 380 agatgtgagtggcatcaatctacactaatgtttctaaaaacaataaagtgaaaaatattt 439
Query: 241 atttaataaaatgtagtaaatataacgctaataaattttgcattatgctaaatttagtaa 300
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aagtaataaaatgtagtaaatataacgctaataaattttgcattatgctaaatttagtaa 499
Query: 301 atcgttcatgcttaatttcaaatgtctcagctcctactggtttaacaatacaatctaaac 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atcgttcatgcttaatttcatatgtctcagctcctactggtttaacaatacaatctaaac 559
Query: 361 agtatttgattaatattaagcataattcatcaaaatatttctagcataaaattacagact 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 560 agtatttgattaatattaagcataattcatcaaaatattgctagcataaaattacagact 619
Query: 421 aatactgcagggattagttaagaaagaactaccatcattttggtgaaaattcatganaac 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 620 aatactgcagggattagttaagaaagaactaccatcattttggtgaaaattcatgaaaac 679
Query: 481 aaacaatttcttaaattttctgaaatatcaaagccccaatatcttttcataggtacttta 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 680 aaacaatttcttaaattttctgaaatatcaaagccccaatatcttttcataagtacttta 739
Query: 541 gtaatttgtattaactatgtcatatttcaaatgcttaatctangtttt-ctttttttt 597
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 740 gtaatttgtattaactatgtcatatttcaaatgcttaatcta-gtttttctttttttt 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 999
Length adjustment: 10
Effective length of query: 590
Effective length of database: 989
Effective search space: 583510
Effective search space used: 583510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no403_m07.g1 MSMg01no403_m07.g1 CHROMAT_FILE:
MSMg01no403_m07.g1 PHD_FILE: MSMg01no403_m07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:11 2005
(514 letters)
>mm_chr6_20444025_20444938
Length = 914
Score = 986 bits (510), Expect = 0.0
Identities = 513/514 (99%)
Strand = Plus / Minus
Query: 1 caggggaaaatttttaatatttttcattgttagaatataaatgatgattattctcataga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 caggggaaaatttttaatatttttcattgttagaatataaatgatgattattctcataga 655
Query: 61 agaattgttatgtatttaacagtaacaagagggattattaaatgaaccagattgtgaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 agaattgttatgtatttaacagtaacaagagggattattaaatgaaccagattgtgaaaa 595
Query: 121 catctcaaaagcccccttagggagtctaattttcttttgcttaattttaaatcataatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 catctcaaaagcccccttagggagtctaattttcttttgcttaattttaaatcataatac 535
Query: 181 tttactaaattatgaggtataagactgtgaaccttagcaaatcagcctatttgtgtctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tttactaaattatgaggtataagactgtgaaccttagcaaatcagcctatttgtgtctat 475
Query: 241 tatatacactggcagcagaggaggaaaaatagcagtcattattgtggctaaaattataat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tatatacactggcagcagaggaggaaaaatagcagtcattattgtggctaaaattataat 415
Query: 301 atggaaaagacatgcatgataaaatgcttttgcaagcatctgaggagtggagaatgaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 atggaaaagacatgcatgataaaatgcttttgcaagcatctgaggagtggagaatgaagg 355
Query: 361 taagaatagtatactaaattgtatgaagaaagaatctcttatgtgagggttttagtgcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 taagaatagtatactaaattgtatgaagaaagaatctcttatgtgagggttttagtgcta 295
Query: 421 tgatttctaatttgcaacacaatgactcacctgtatttaaaattgtctatatgaaagtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tgatttctaatttgcaacacaatgactcacctgtatttaaaattgtctatatgaaagtga 235
Query: 481 atgtaattaatatacagcatgacaatttaagaca 514
|||||||||||||||||||||||||||| |||||
Sbjct: 234 atgtaattaatatacagcatgacaatttcagaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
