Query= MSMg01no404_c01.b1 MSMg01no404_c01.b1 CHROMAT_FILE:
MSMg01no404_c01.b1 PHD_FILE: MSMg01no404_c01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:40 2005
(463 letters)
>mm_chr6_36721934_36722796
Length = 863
Score = 855 bits (442), Expect = 0.0
Identities = 457/462 (98%)
Strand = Plus / Plus
Query: 1 agactacagcagtgtgcccctgagactaaggtttaagccttagtgtgagatagaaaaaac 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agactacagcagtgtgtccctgagactaaggtttaagccttagtgtgagatagaaaaaac 260
Query: 61 agaagatgatctggtgccaggcctcaagaaggctttcctgagagacgaaactgagaaata 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 agaagatgatctggtgccaggcctcaagaaggctttcctgagagacaaaactgagaaata 320
Query: 121 agttggcagtaaaagagaaggcactgcacctaggcatagaagaaagtgcctatatcttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttggcagtaaaagagaaggcactgcacctaggcatagaagaaagtgcctatatcttct 380
Query: 181 tggaaatcaaggtggggcagggaaggcttttcagaaacaatgaagcctgttgggacctgg 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 tggaaatcaaggtggggcagggaaggcgtttcagaaacaatgaagcctgttgggacctgg 440
Query: 241 aaatgaagagcgggcattggctggtgttatggcaatgtatgggcatgttcagcacaggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatgaagagcgggcattggctggtgttatggcaatgtatgggcatgttcagcacaggag 500
Query: 301 tctcctcatcagggaggcagagccctgctgcatcccaagtgaggcccacaaaatcatgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 501 tctcctcatcagggaggcagagccctgctgcatcccaagtgaggcccacaaaaccatgtc 560
Query: 361 tccaatctctaaatgttaccttgaccaggtaagactcttcctctcaaaacatcactctgg 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccaatccctaaatgttaccttgaccaggtaagactcttcctctcaaaacatcactctgg 620
Query: 421 atatgatacagatttgaacttccttgcaccgtctttgaggag 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atatgatacagatttgaacttccttgcaccgtctttgaggag 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no404_c01.g1 MSMg01no404_c01.g1 CHROMAT_FILE:
MSMg01no404_c01.g1 PHD_FILE: MSMg01no404_c01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:41 2005
(352 letters)
>mm_chr6_36910616_36911366
Length = 751
Score = 603 bits (312), Expect = e-177
Identities = 342/352 (97%), Gaps = 1/352 (0%)
Strand = Plus / Minus
Query: 1 attctcttcttccttctccctctgatctttgctctgaatattttttttcccacttctgtc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 551 attctcttcttccttctccctctgatctttgctctgaata-tttttttcccacttctgtc 493
Query: 61 tgttactcaagagccctatgctgatgttttgggcattatcaaatcaccttgtcggttgtc 120
|||||||||||||||||||||||||||||| ||||||| |||||||||||||| | ||||
Sbjct: 492 tgttactcaagagccctatgctgatgtttttggcattaccaaatcaccttgtcagatgtc 433
Query: 121 ttgcaatccgccatcattcatgtctgcttgattttatacaattctctcaccagttttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ttgcaatccgccatcattcatgtctgcttgattttatacaattctctcaccagttttcct 373
Query: 181 ctgatgcatctgttgcactcctgagccttcttccacggagctgaagcttgcagttgcaag 240
|||||||||||||||| ||||||||||||||||||| |||||| | ||||||||||||||
Sbjct: 372 ctgatgcatctgttgccctcctgagccttcttccacagagctgcaccttgcagttgcaag 313
Query: 241 tccaccaccatgctgttaggcaagtgtgtcacgtggctgcgctcccacagccatgtatgc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 312 tccaccaccatgctgttaggcaagtgtgtcacgtggctgcgctcccacagccctgtatgc 253
Query: 301 catccctgagtggcctttgctctccgatctctcattacctaattaattggct 352
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 catccctgagtggcctttgctctccgatctctcattacctaattaattggct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 751
Length adjustment: 9
Effective length of query: 343
Effective length of database: 742
Effective search space: 254506
Effective search space used: 254506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
