Query= MSMg01no404_d08.b1 MSMg01no404_d08.b1 CHROMAT_FILE:
MSMg01no404_d08.b1 PHD_FILE: MSMg01no404_d08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:47 2005
(440 letters)
>mm_chr6_66430815_66431653
Length = 839
Score = 779 bits (403), Expect = 0.0
Identities = 431/441 (97%), Gaps = 3/441 (0%)
Strand = Plus / Minus
Query: 1 aaactggacagagatccctaagagacggatggtatgaggtcagggcatgccttccctatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aaactggacagagatccctaagagacggatggtatgaggtcagggcatgccttccctatt 580
Query: 61 gccagcctcatctttcctgactgcattattctctccgtgagagtctcccacaggattgtt 120
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 579 gccagcctcgtctttcctgactgcattcttctctccgtgagagtctcccacaggattgtt 520
Query: 121 ctctatgggctctttctgaggcatttattattgctaacctttccaggcttactctgctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ctctatgggctctttctgaggcatttattattgctaacctttccaggcttactctgctga 460
Query: 181 cctcagtccctcttggactttggcaatggcactttcagtggcaacccccatgagcatagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 cctcagtccctcttggactttggcaatggcactttcagtggcaacccccatgagcatagg 400
Query: 241 tgagcatacccgctattttctgaatatggcttatccacttcttcttgagcagttacttag 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tgagcatacctgctattttctgaatatggcttatccacttcttcttgagcagttacttag 340
Query: 301 agtgtttacaactctctgagaccatgtactttctgctcagcaattgacttaaactgataa 360
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 339 agtgtttacaactctctgaaaccatgtactttctgctcagcaattgacttaagctgataa 280
Query: 361 atatttcattgccaaaatcgcaggatttttttttccaaaaaaa-tttcatatagcctgca 419
||||||||||||||| ||||||||||||||||| |||||||| |||||| |||||||||
Sbjct: 279 atatttcattgccaa--tcgcaggattttttttttcaaaaaaaatttcatttagcctgca 222
Query: 420 tgtctgtttgtgtactgtgtg 440
|||||||||||||||||||||
Sbjct: 221 tgtctgtttgtgtactgtgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 839
Length adjustment: 9
Effective length of query: 431
Effective length of database: 830
Effective search space: 357730
Effective search space used: 357730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no404_d08.g1 MSMg01no404_d08.g1 CHROMAT_FILE:
MSMg01no404_d08.g1 PHD_FILE: MSMg01no404_d08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:47 2005
(337 letters)
>mm_chr6_66308761_66309497
Length = 737
Score = 615 bits (318), Expect = e-180
Identities = 332/337 (98%)
Strand = Plus / Plus
Query: 1 tttcctggncctggccttgctgaagattgccctcactgtctcacatcttctgaagctgtc 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcctggtcctggccttgctgaagattgccctcactgtctcacatcttctgaagctgtc 260
Query: 61 agaagggaacacactgttttgaaatgctatccagtgattgtttattcctggtcactctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaagggaacacactgttttgaaatgctatccagtgattgtttattcctggtcactctct 320
Query: 121 ggcctgaaactctcctcctactgtgtgaggcatcccgagcttcagaagggggcagaggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcctgaaactctcctcctactgtgtgaggcatcccgagcttcagaagggggcagaggcc 380
Query: 181 agcccagagcaatggagatgaaattcaaatttggacttccaaagttgattggctctcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcccagagcaatggagatgaaattcaaatttggacttccaaagttgattggctctcttt 440
Query: 241 gagttgactatttaaagaatataatgtctcaaggaaagggacaggatgaccatccgaagt 300
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 gagttgacaatttaaagaatataatgtctcaaggaaagggacaggaggaccatccgaagt 500
Query: 301 taaaactaaaacaatatctataaaacacttttaagcc 337
|||||||||||||||| | ||||||||||||||||||
Sbjct: 501 taaaactaaaacaataacaataaaacacttttaagcc 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
