Query= MSMg01no404_l04.b1 MSMg01no404_l04.b1 CHROMAT_FILE:
MSMg01no404_l04.b1 PHD_FILE: MSMg01no404_l04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:27 2005
(222 letters)
>mm_chr6_120518384_120519004
Length = 621
Score = 375 bits (194), Expect = e-108
Identities = 215/222 (96%), Gaps = 1/222 (0%)
Strand = Plus / Minus
Query: 1 ctcatgtctgtccccctgcagcaggtatttctgtgtgtctactgtcagataagcctttgg 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 421 ctcatgtctgtccccctgcagcaggtatttctgggtgtctactgtcagataagcctttgg 362
Query: 61 tgggcccagagggcacaatagtaagcaaccattcagaatgtcctcgaacagccttcgtcc 120
||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 361 tgggcccagagggcacagtagtaagcaaccgttcagaatgtcctcgaacagcctttgtcc 302
Query: 121 tgccgtgaggcaagcattaaaggagtcaggagggatgtgacagttcacacagtcttacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgccgtgaggcaagcattaaaggagtcaggagggatgtgacagttcacacagtcttacct 242
Query: 181 atcattcgtgaaatcctgggtcctaaggcagaggtgtctgaa 222
| |||||||||| |||||||||| ||||||||||||||||||
Sbjct: 241 agcattcgtgaagtcctgggtcc-aaggcagaggtgtctgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 621
Length adjustment: 9
Effective length of query: 213
Effective length of database: 612
Effective search space: 130356
Effective search space used: 130356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no404_l04.g1 MSMg01no404_l04.g1 CHROMAT_FILE:
MSMg01no404_l04.g1 PHD_FILE: MSMg01no404_l04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:28 2005
(251 letters)
>mm_chr6_120321731_120322381
Length = 651
Score = 455 bits (235), Expect = e-132
Identities = 247/251 (98%), Gaps = 1/251 (0%)
Strand = Plus / Plus
Query: 1 tctcttttgggtgggtgtgatggtccatactttaatcctgccacttgggaggtagaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tctcttttgggtgggtgtgatggtccatactttaatcctgccacttgggaggtagaggca 259
Query: 61 gatctacctcaatatgaggccagttacatagtgagactctgtctttaaaaagagagagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gatctacctcaatatgaggccagttacatagtgagactctgtctttaaaaagagagagag 319
Query: 121 agacagacagatagacagacagacatccccccc-aacacattcacccatgcacacacaca 179
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 320 agacagacagatagacagacagacatccccccccaacacattcacccatgcacacacaaa 379
Query: 180 ctcttttattcaggtacagtattgcacatttgtaagctcagcactcaaaaggcttaggta 239
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctcttttaaccaggtacagtattgcacatttgtaagctcagcactcaaaaggcttaggta 439
Query: 240 agagtattgtt 250
|||||||||||
Sbjct: 440 agagtattgtt 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
