BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-405A22.T7 (MSMg01no405_a22.b1) | MSMg01-405A22.TJ (MSMg01no405_a22.g1) |
ACC | AG503578 | AG503579 |
length | 815 | 854 |
length of high quality (start - end) | 392 (47 - 438) | 221 (78 - 298) |
definition | CHROMAT_FILE: MSMg01no405_a22.b1 PHD_FILE: MSMg01no405_a22.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:19:56 2005 | CHROMAT_FILE: MSMg01no405_a22.g1 PHD_FILE: MSMg01no405_a22.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:19:56 2005 |
singlet/doublet | --- | singlet |
---|
BLAST hit | no hit data | unique |
---|
sequence | NTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCACTTATCATCTCCTAGAATCTAAAAGACTTGGGTAGCCCCGCAT
TTCCAGCTCTGCCATTTGAAGCACACACTACTTGTCTTAGTCTCATGATG
GCTTTGTACCTGCTACTGGCCTTAGCATACATAGTTTGGCACCCTCAATA
TTCTGGGGTTTCCATTGCAGCAGAGGCTGTGACTTTACCAGTGGCCTTTC
CTGTTCTCACTTAAAAAGCTTGATCCTGGCACATGCTGCTTGCCAGGTTG
CAGCCACTCTCTATACCCCACTGATCTTCTATCTGTATTACCTTCAAAGC
TTGTACCATACGGGAGACTCTCACATATTGTTAAGTATGGCTTCCAACTT
GAGGTGACGTCTGTTTCTCCTGGACCACAGCTTTTGTGTGCTGTCTCTGA
GGCATGCTTCCTATAAAAAAATTGGCTCAGTGATGTTACTTATCTTGTTC
AACATAGTATGATTCTCCCTTTGTCCACCCCCCCTTGTTTTTGCCCACCC
CAGAAGGATTCCTCTTTATTGGTGCTGCCCCTCTCTCTCTATTAAATTTT
TTTTATTTTTTCCCCTGGATTTTTTTTCCTTCTTTTCTTCTCTCTTTTCC
CTTTTCTTTTTTTCTTTTTCGTACCCCCTTTTCTTCCTCTCTCTTCTTTC
TTTCTCATTCACCCCCTTCTCCCTCTTCTCTTTTTCATTCCCTCACATTT
GATATCCATTTTTATTTTATTTTGACTTTTCATTTTATTTTTCTCCCTCC
TCTTATTTCCCCCTT
| CCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCCTTCAGTTTCTTTTTAAATTT
TGAGCTTTGAGGAGTGTATATGGACTTGAGGAAGCATTTACTATTCTAAT
TTTATTAATTATATCTGTTTTCAAATATTTATCTATGATTACATTTTTAT
TGTGTTAAAATCTCTATTCTGTACCTTTAATTTTTACCCCTTTCCCCATC
CCCTCCCCCGACTTTTTTTTTTTTGGTTCTATCATTAGTGTCCTGCTCTT
AAAATTTATGTCTTCCTAGAGACTGATCCTCTGTCTAGTTTGAGTCTTTT
CTTTACACTGCACTGCTCTTGATCTGTGCTTTGTCCCTCCCTACTCTCCT
TTTTCTTGACTTTGTGTTTTCTCTTTCTCTTTTTTTCCTCTCTTCTCACC
CTTTTTCCTTCCCGTTCCCCTCTTTCTTTCCGCTTTTCCCACTCCCTGTT
TTTCTCCCATTTTTTTTCTCCCTTTTTTTCCCTTTCTCTTCTCCCTACCT
CCTATTCCTCACCCCTTCCTTTTTTCCGTTCCTCTATTTTTTACTCATCT
CCCCCCCCTTCCTCTTCTTCATTCTCGTTTTACCCCGTTCATTCTTTTCC
CCCTTCTTTTTTTTTCTCCCTTCTTTTTTTTCCCTCTCTCTTGCCGTTTT
TTTGTTTTTCCCTCTCTTTTTATTCCCTCGTTTATCGCTCTTCTCTTCTT
CTACTTTCCTCTCTTTTTTCTCCCCCCCCTTTCTTCCTCTCTTTTTTTTC
TCTTCCCCTTTTTTCCGCCTTCTTTTTTCTTCTCCTCCTCGCTTTCCTTT
TCCT
|
quality values | Open.Hide. 0 3 9 17 15 22 15 9 8 8 8 21 21 18 9 9 10 22 22 30 30 30 30 43 43 48 30 28 21 20 20 19 21 10 9 9 10 9 9 9 11 10 10 10 17 19 23 34 41 41
33 33 36 36 41 33 39 37 37 37 25 24 11 11 9 11 11 12 11 22 15 27 30 37 37 39 44 59 57 59 59 57 57 53 53 53 50 59 59 59 59 59 59 59 68 68 68 68 68 68
68 51 51 42 50 50 50 68 68 68 50 50 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 68 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 48 48 48 59 59 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 48 48 48 57 57 57
57 59 54 54 48 57 48 54 54 57 44 42 41 47 46 46 46 54 54 57 57 54 54 54 54 54 57 43 43 25 25 25 36 31 42 46 43 42 39 42 39 39 37 43 35 35 35 59 59 57
57 39 39 39 43 43 43 40 40 40 41 39 28 27 25 26 27 32 31 31 37 20 20 22 19 22 30 28 31 28 25 24 21 27 23 16 18 21 23 14 14 12 19 19 16 19 11 10 10 15
19 30 23 19 16 17 13 13 17 16 15 14 14 15 15 20 20 25 16 16 17 11 11 10 10 12 12 11 11 10 12 11 12 10 10 12 12 15 12 12 8 9 10 10 10 11 6 6 8 6
10 13 9 9 9 8 8 9 8 15 13 15 13 15 8 8 8 8 8 8 8 8 9 9 10 10 15 10 12 10 10 10 10 10 10 12 11 11 10 10 9 9 10 10 11 10 10 10 16 10
10 9 9 9 12 11 11 10 10 12 10 7 6 6 8 8 6 6 8 10 8 8 8 8 8 8 10 9 9 8 8 8 8 8 8 8 8 8 8 8 8 9 11 11 11 11 11 19 18 22
23 13 12 8 8 8 10 10 10 11 11 13 17 13 13 8 8 8 8 6 6 10 10 8 8 8 8 8 8 9 9 8 8 11 10 8 8 9 9 10 10 12 14 14 14 12 10 8 8 6
7 10 11 19 12 11 10 9 9 10 15 12 12 10 8 8 9 10 12 8 8 9 9 11 15 17 17 16 15 11 10 13 10 8 8 8 8 8 12 10 12 14 16 16 17 12 10 8 8 6
7 8 10 10 8 8 6 6 8 8 6 6 11 11 12 10 10 8 12 10 10 8 8 8 8 8 8 10 8 8 10 9 8 8 6 6 6 8 8 9 9 9 8 8 6 6 8 8 12 8
9 8 8 6 6 10 6 8 8 8 7 6 8 6 6 10 10 10 10 9 9 13 8 8 8 8 8 8 8 8 6 6 6 13 7 6 6 6 12 12 10 6 8 7 7 10 15 10 10 10
10 19 15 10 10 9 12 10 12 12 12 11 14 10 9 | Open.Hide. 6 6 6 8 10 11 11 9 9 25 9 9 9 23 24 37 37 37 31 37 37 37 39 37 36 36 32 41 37 36 34 16 11 8 8 8 8 13 15 30 22 28 28 33 32 37 39 39 47 44
36 34 33 33 34 37 57 57 57 57 43 41 23 22 24 24 29 29 37 43 57 42 42 41 41 47 50 59 68 68 50 50 47 47 47 50 57 68 68 68 68 68 68 68 68 68 68 68 68 68
68 68 68 68 68 68 68 59 59 59 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 57 59 59 59 57 57 57 57 57 57 57 57
57 57 57 68 57 50 51 50 50 50 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 59 59 39 37 41 35 41 41 59
42 48 48 48 48 48 59 59 59 59 57 57 57 59 59 59 59 54 54 54 57 44 32 21 12 12 25 24 35 39 28 24 14 14 14 26 15 18 17 17 18 30 28 32 21 26 14 14 12 15
19 15 11 11 15 25 21 15 10 9 9 8 15 10 8 8 9 12 12 13 10 10 10 10 9 9 9 9 10 8 8 8 14 13 9 10 11 11 11 11 11 10 10 11 15 15 24 22 20 13
10 10 13 8 8 8 7 8 8 6 8 8 8 8 9 8 8 8 8 8 8 10 17 18 16 14 8 8 8 8 8 8 6 6 8 7 9 10 9 13 13 12 10 8 8 9 9 9 12 9
12 10 12 11 11 11 11 10 10 11 10 8 8 8 8 8 10 14 15 8 8 8 12 8 8 10 8 8 8 9 10 8 8 8 8 8 10 10 13 8 8 8 8 11 7 7 6 6 8 10
6 6 8 8 14 10 10 10 9 10 10 10 8 8 8 17 19 16 12 12 9 9 8 9 8 10 11 15 10 11 8 9 8 12 19 19 12 9 8 8 6 6 8 8 11 14 8 8 8 8
10 15 13 12 12 12 15 15 19 16 18 11 11 11 11 15 9 9 9 9 11 16 12 12 15 24 14 9 12 9 9 12 12 10 8 8 10 10 10 8 8 9 9 10 9 11 9 9 8 8
8 6 6 7 6 8 9 12 11 8 8 8 8 8 6 6 8 8 9 10 15 20 26 22 12 11 10 11 11 14 14 11 12 7 7 6 6 7 13 13 10 8 8 8 10 6 6 8 8 8
8 8 12 14 17 16 12 11 10 11 12 15 11 16 13 8 8 8 8 6 9 8 12 10 9 8 8 8 8 8 8 8 8 8 9 12 11 9 10 9 7 8 8 11 15 22 29 23 18 11
11 9 8 8 8 8 14 17 15 11 11 10 8 7 6 8 8 8 11 8 8 8 8 9 9 9 9 21 15 11 11 11 10 10 8 8 9 10 10 10 19 8 8 8 8 8 11 20 18 22
20 11 10 10 10 12 13 15 9 9 9 9 11 9 10 10 10 10 10 15 10 10 10 11 13 12 11 7 7 7 8 10 9 10 9 12 12 13 10 10 12 12 8 8 10 10 10 10 9 9
15 11 11 11 10 10 13 13 8 8 8 7 6 10 10 18 16 18 11 10 10 10 10 11 15 12 12 8 9 8 8 8 8 8 8 8 15 9 10 10 8 8 8 10 12 16 11 13 8 8
8 8 8 8 8 8 10 8 8 8 13 9 10 13 13 8 8 8 8 17 16 14 10 16 12 8 13 10 10 10 10 8 8 8 8 10 11 17 12 10 11 11 12 11 10 11 11 10 14 25
18 16 9 9 |