Query= MSMg01no405_f13.b1 MSMg01no405_f13.b1 CHROMAT_FILE:
MSMg01no405_f13.b1 PHD_FILE: MSMg01no405_f13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:18 2005
(240 letters)
>mm_chr6_46858622_46859261
Length = 640
Score = 447 bits (231), Expect = e-130
Identities = 237/239 (99%)
Strand = Plus / Plus
Query: 2 aatacaagatcttctgatagagggtcagaatacattacaacagcaactctgtaactactc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aatacaagatcttctgatagagggtcagaatacattacaacagcaactctgtaactactc 261
Query: 62 tgtcgtgaacttggtagggatgcttctcatgcacactgaatgccactgaaacctacagaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgtcgtgaacttggtagggatgcttctcatgcacactgaatgccactgaaacctacagaa 321
Query: 122 gggaaattaaggcttattttcctataagcaatccatcaatacattgtgacaccatctact 181
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 322 gggaaattaaggcttattttcctataagcaatccatcaatacattgtgacaccaactact 381
Query: 182 cttatcacagttcatctggcacacaagaaaacctagattccagtaaatctttcaaagta 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 382 cttatcacagttcatctggcacacaagaaaacctagattccagtaaatatttcaaagta 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no405_f13.g1 MSMg01no405_f13.g1 CHROMAT_FILE:
MSMg01no405_f13.g1 PHD_FILE: MSMg01no405_f13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:18 2005
(560 letters)
>mm_chr6_46971061_46972021
Length = 961
Score = 717 bits (371), Expect = 0.0
Identities = 380/383 (99%), Gaps = 1/383 (0%)
Strand = Plus / Minus
Query: 1 attattgtcagtaaccaagaagaag-aaaaataataaatttctcttgagggtggagtgtc 59
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 383 attattgtcagtaaccaagaagaagaaaaaaaaataaatttctcttgagggtggagtgtc 324
Query: 60 tatgtgcaggcattcatttaatttcttcatttaattcccagaaaacttctaagaagttac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tatgtgcaggcattcatttaatttcttcatttaattcccagaaaacttctaagaagttac 264
Query: 120 caccatcaactccagagaagaaaactgaagcccaggaaagttggcaataagatattcttg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 caccatcaactccagagaagaaaactgaagcccaggaaagttggcaataagatattcttg 204
Query: 180 ttgctaaaggtgcaatagtggcactcatatcttagtggtaactaacagcatcctaattga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ttgctaaaggtgcaatagtggcactcatatcttagtggtaactaacagcatcctaattga 144
Query: 240 atttaagtcctgtataacaggggagaaatcatacctggtagtggaaacttagcaaactac 299
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 attcaagtcctgtataacaggggagaaatcatacctggtagtggaaacttagcaaactac 84
Query: 300 ccaggggtagtgaagttatagatattacaggagaatttacaactgaaattttactatacc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 ccaggggtagtgaagttatagatattacaggagaatttacaactgaaattttactatacc 24
Query: 360 agcataaatcttaactccactct 382
|||||||||||||||||||||||
Sbjct: 23 agcataaatcttaactccactct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 961
Length adjustment: 10
Effective length of query: 550
Effective length of database: 951
Effective search space: 523050
Effective search space used: 523050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
