Query= MSMg01no405_m03.b1 MSMg01no405_m03.b1 CHROMAT_FILE:
MSMg01no405_m03.b1 PHD_FILE: MSMg01no405_m03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:50 2005
(238 letters)
>mm_chr6_5110943_5111580
Length = 638
Score = 445 bits (230), Expect = e-129
Identities = 236/238 (99%)
Strand = Plus / Minus
Query: 1 aataacgataaaaatgaaaagtcacaatgttaaaatacaaagtgaggccacacaggcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aataacgataaaaatgaaaagtcacaatgttaaaatacaaagtgaggccacacaggcagc 379
Query: 61 cgacctctatcctatcagattcctgtcctaactctggagcctgatgcaggccctgcatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cgacctctatcctatcagattcctgtcctaactctggagcctgatgcaggccctgcatac 319
Query: 121 ctgtgcatgcagaggagatgtgtacaggcctgcgggcagcacgagggcctgctgggggaa 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 318 ctgtgcatgcagaggagatgtgtacaggcctgcgggcagcacaagggcctgctgggggaa 259
Query: 181 agtaaggaaataccctgaagtccaaggtttcatctggcctccagctctactctgaaat 238
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aggaaggaaataccctgaagtccaaggtttcatctggcctccagctctactctgaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no405_m03.g1 MSMg01no405_m03.g1 CHROMAT_FILE:
MSMg01no405_m03.g1 PHD_FILE: MSMg01no405_m03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:50 2005
(415 letters)
>mm_chr6_4956830_4957644
Length = 815
Score = 795 bits (411), Expect = 0.0
Identities = 414/415 (99%)
Strand = Plus / Plus
Query: 1 ataattccccatgaatctctcatacctatttgatcatatccagacttaggtctattcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataattccccatgaatctctcatacctatttgatcatatccagacttaggtctattcttt 260
Query: 61 aggaatttctaacatgtctcctaggttgtcactggccagtttttccctgcttctcactgt 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 aggaatttctaacatgtctcctaggttgtcactgaccagtttttccctgcttctcactgt 320
Query: 121 acttcagtatatttttctacccaaatgagtacctttcccaacgcaccccacattgggttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttcagtatatttttctacccaaatgagtacctttcccaacgcaccccacattgggttt 380
Query: 181 ctctactcttatatttttggttgtgagcctagactttaatggttgagccttctctccagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctactcttatatttttggttgtgagcctagactttaatggttgagccttctctccagc 440
Query: 241 ctgggtttctacattctgtaagacatttatatcctgacacatttaacacctatgccacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgggtttctacattctgtaagacatttatatcctgacacatttaacacctatgccacct 500
Query: 301 attgggtacctactgtattccaggtaaaatgccaaatatttcatgtagctggctattgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attgggtacctactgtattccaggtaaaatgccaaatatttcatgtagctggctattgcc 560
Query: 361 cattgatttctgcttaactgtacaaatatatcttcatggtaaaattttaagtttt 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattgatttctgcttaactgtacaaatatatcttcatggtaaaattttaagtttt 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
