MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-406F19
Chromosome	6 (Build37)
Map Location	141,270,093 - 141,270,396
singlet/doublet	singlet
Overlap gene	Pde3a
Upstream gene	LOC100039020, LOC269810, Plekha5, Aebp2, EG664868, LOC664875
Downstream gene	Slco1c1, Slco1b2, EG435927, Slco1a4, LOC100042750, EG664913, Slco1a1, EG625716, Slco1a6, Slco1a5, Iapp
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039020 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039020
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein

name	LOC269810 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:269810
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 91 ESTs, 5 Proteins pseudo : _no_value

name	Plekha5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109135 MGI:1923802
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aebp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11569 MGI:1338038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	EG664868 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664868 MGI:3646625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 469 ESTs, 4 Proteins

name	LOC664875 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 69 ESTs, 6 Proteins pseudo : _no_value

name	Pde3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54611 MGI:1860764
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slco1c1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58807 MGI:1889679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slco1b2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28253 MGI:1351899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG435927 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435927 MGI:3643685
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 Proteins

name	Slco1a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28250 MGI:1351896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042750 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042750
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	EG664913 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664913 MGI:3644299
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Slco1a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28248 MGI:1351891
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625716 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625716 MGI:3647159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slco1a6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28254 MGI:1351906
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slco1a5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108096 MGI:1351865
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Iapp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15874 MGI:96382
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039020 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149256017 GeneID:100039020
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : similar to reproductive homeobox on X chromosome 8 transcript_id : XM_001472100.1

name	Plekha5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110835705 GeneID:109135 MGI:1923802
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain containing, family A member 5 transcript_id : NM_144920.3

name	Aebp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130635 GeneID:11569 MGI:1338038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : AE binding protein 2 transcript_id : NM_178803.2

name	Aebp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54112426 GeneID:11569 MGI:1338038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : AE binding protein 2 transcript_id : NM_001005605.1

name	Aebp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86277300 GeneID:11569 MGI:1338038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : AE binding protein 2 transcript_id : NM_009637.3

name	EG664868 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378321 GeneID:664868 MGI:3646625
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 469 ESTs, 4 Proteins product : predicted gene, EG664868 transcript_id : XM_973154.1

name	Pde3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9055303 GeneID:54611 MGI:1860764
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 3A, cGMP inhibited transcript_id : NM_018779.1

name	Slco1c1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946865 GeneID:58807 MGI:1889679
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 1c1 transcript_id : NM_021471.1

name	Slco1b2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:14547898 GeneID:28253 MGI:1351899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 1b2 transcript_id : NM_020495.1

name	Slco1b2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130560 GeneID:28253 MGI:1351899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 1b2 transcript_id : NM_178235.2

name	EG435927 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149256028 GeneID:435927 MGI:3643685
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 Proteins product : predicted gene, EG435927 transcript_id : XM_973315.2

name	Slco1a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13507613 GeneID:28250 MGI:1351896
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 1a4 transcript_id : NM_030687.1

name	LOC100042750 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149256030 GeneID:100042750
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to ERV-BabFcenv provirus ancestral Env polyprotein precursor (Envelope polyprotein) (BabFcenv) transcript_id : XM_001478749.1

name	EG664913 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378325 GeneID:664913 MGI:3644299
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG664913 transcript_id : XM_973397.1

name	Slco1a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803170 GeneID:28248 MGI:1351891
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 1a1 transcript_id : NM_013797.2

name	EG625716 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486774 GeneID:625716 MGI:3647159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG625716 transcript_id : NM_001081318.1

name	Slco1a6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12963796 GeneID:28254 MGI:1351906
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 1a6 transcript_id : NM_023718.1

name	Slco1a5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801812 GeneID:108096 MGI:1351865
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 1a5 transcript_id : NM_130861.2

name	Iapp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754271 GeneID:15874 MGI:96382
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : islet amyloid polypeptide transcript_id : NM_010491.1

name	LOC100039020 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149256018 GeneID:100039020
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472150.1

name	Plekha5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110835706 GeneID:109135 MGI:1923802
definition	codon_start : 1 note : Gt(Ayu21)9Imeg product : phosphoinositol 3-phosphate-binding protein-2 protein_id : NP_659169.3

name	Aebp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54112427 CCDS:CCDS20673.1 GeneID:11569 MGI:1338038
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003714 - transcription corepressor activity [Evidence IMP] [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : AE binding protein 2 isoform 1 protein_id : NP_001005605.1

name	Aebp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753000 GeneID:11569 MGI:1338038
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003714 - transcription corepressor activity [Evidence IMP] [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : AE binding protein 2 isoform 3 protein_id : NP_033767.1

name	Aebp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54112425 CCDS:CCDS20674.1 GeneID:11569 MGI:1338038
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003714 - transcription corepressor activity [Evidence IMP] [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : AE binding protein 2 isoform 2 protein_id : NP_848918.1

name	EG664868 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378322 GeneID:664868 MGI:3646625
definition	codon_start : 1 product : similar to ribosomal protein L38 protein_id : XP_978248.1

name	Pde3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055304 CCDS:CCDS20676.1 GeneID:54611 MGI:1860764
definition	GO_function : GO:0004119 - cGMP-inhibited cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 function : hydrolysis of cAMP and cGMP note : cGMP-inhibited phosphodiesterase product : phosphodiesterase 3A, cGMP inhibited protein_id : NP_061249.1

name	Slco1c1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946866 CCDS:CCDS20677.1 GeneID:58807 MGI:1889679
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : solute carrier family 21 (organic anion transporter), member 14 product : solute carrier organic anion transporter family, member 1c1 protein_id : NP_067446.1

name	Slco1b2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14547899 CCDS:CCDS20678.1 GeneID:28253 MGI:1351899
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008514 - organic anion transporter activity [Evidence ISS]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; liver-specific organic anion transporter 1; liver-specific organic anion transporter; solute carrier family (organic anion transporter) member 10; solute carrier family 21 (organic anion transporter), member 6; solute carrier family 21 (organic anion transporter), member 10 product : solute carrier organic anion transporter family, member 1b2 isoform 1 protein_id : NP_065241.1

name	Slco1b2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30102937 CCDS:CCDS20679.1 GeneID:28253 MGI:1351899
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008514 - organic anion transporter activity [Evidence ISS]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; liver-specific organic anion transporter 1; liver-specific organic anion transporter; solute carrier family (organic anion transporter) member 10; solute carrier family 21 (organic anion transporter), member 6; solute carrier family 21 (organic anion transporter), member 10 product : solute carrier organic anion transporter family, member 1b2 isoform 2 protein_id : NP_839953.1

name	EG435927 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149256029 GeneID:435927 MGI:3643685
definition	codon_start : 1 product : similar to organic anion transporting polypeptide 2 protein_id : XP_978409.2

name	Slco1a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507614 GeneID:28250 MGI:1351896
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008514 - organic anion transporter activity [Evidence IDA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : organic anion transporting polypeptide 2; solute carrier family 21 (organic anion transporter), member 5 product : solute carrier organic anion transporter family, member 1a4 protein_id : NP_109612.1

name	LOC100042750 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149256031 GeneID:100042750
definition	codon_start : 1 product : similar to ERV-BabFcenv provirus ancestral Env polyprotein precursor (Envelope polyprotein) (BabFcenv) protein_id : XP_001478799.1

name	EG664913 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378326 GeneID:664913 MGI:3644299
definition	codon_start : 1 product : hypothetical protein protein_id : XP_978491.1

name	Slco1a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305497 GeneID:28248 MGI:1351891
definition	GO_component : GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IDA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008514 - organic anion transporter activity [Evidence IDA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0015711 - organic anion transport [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 function : mediates transport of organic solutes note : solute carrier family 21 (organic anion transporter), member 1 product : solute carrier organic anion transporter family, member 1a1 protein_id : NP_038825.1

name	EG625716 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486775 GeneID:625716 MGI:3647159
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : predicted gene, EG625716 protein_id : NP_001074787.1

name	Slco1a6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963797 GeneID:28254 MGI:1351906
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : organic anion-transporting polypeptide; solute carrier family (organic anion transporter) member 13; solute carrier family 21 (organic anion transporter), member 13 product : solute carrier organic anion transporter family, member 1a6 protein_id : NP_076207.1

name	Slco1a5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18700000 GeneID:108096 MGI:1351865
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015125 - bile acid transporter activity [Evidence ISS]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : solute carrier family 21 (organic anion transporter), member 7 product : solute carrier organic anion transporter family, member 1a5 protein_id : NP_570931.1

name	Iapp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754272 GeneID:15874 MGI:96382
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005179 - hormone activity [Evidence IEA] codon_start : 1 product : islet amyloid polypeptide protein_id : NP_034621.1

name	(CDS detail)
type	STS
link
xref	UniSTS:125483
definition	standard_name : MT445

name	(CDS detail)
type	STS
link
xref	UniSTS:159583
definition	standard_name : AI428202

name	(CDS detail)
type	STS
link
xref	UniSTS:235569
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:123230
definition	standard_name : 14.MMHAP6FLE2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:165495
definition	standard_name : AI586002

name	(CDS detail)
type	STS
link
xref	UniSTS:224771
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:123705
definition	standard_name : 25.MMHAP94FLA4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:123949
definition	standard_name : 31.MMHAP63FLC4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:235570
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179486
definition	standard_name : C87899

name	(CDS detail)
type	STS
link
xref	UniSTS:208045
definition	standard_name : BB361933

name	(CDS detail)
type	STS
link
xref	UniSTS:225370
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130655
definition	standard_name : D6Mit112

name	(CDS detail)
type	STS
link
xref	UniSTS:165496
definition	standard_name : AI785519

name	(CDS detail)
type	STS
link
xref	UniSTS:164342
definition	standard_name : AI790453

name	(CDS detail)
type	STS
link
xref	UniSTS:130680
definition	standard_name : D6Mit136

name	(CDS detail)
type	STS
link
xref	UniSTS:164342
definition	standard_name : AI790453

name	(CDS detail)
type	STS
link
xref	UniSTS:130843
definition	standard_name : D6Mit293.1

name	(CDS detail)
type	STS
link
xref	UniSTS:130842
definition	standard_name : D6Mit293

name	(CDS detail)
type	STS
link
xref	UniSTS:209451
definition	standard_name : BB464475

name	(CDS detail)
type	STS
link
xref	UniSTS:224094
definition	standard_name : Slc21a7

name	LOC269810 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149256027 GeneID:269810
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 91 ESTs, 5 Proteins product : similar to ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d pseudo : _no_value transcript_id : XR_033820.1

name	LOC664875 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149256019 GeneID:664875
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 69 ESTs, 6 Proteins product : similar to putative ribosomal protein L11 protein pseudo : _no_value transcript_id : XR_030598.1

clone name	MSMg01-385A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-423J15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-472P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183L14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-062F13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-207N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087N04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-515N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311M06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-341G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092D07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-189L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047A18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-334L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267I13
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-406F19.T7 (MSMg01no406_f19.b1)	MSMg01-406F19.TJ (MSMg01no406_f19.g1)
ACC	AG504575	AG504576
length	730	766
length of high quality (start - end)	515 (77 - 591)	308 (82 - 389)
definition	CHROMAT_FILE: MSMg01no406_f19.b1 PHD_FILE: MSMg01no406_f19.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:21:38 2005	CHROMAT_FILE: MSMg01no406_f19.g1 PHD_FILE: MSMg01no406_f19.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:21:38 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NNAAATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCC GCGGAATTCAGTTCTTCCCTTCAAGGCTGGTAGTTCACAACTCCCTGTAA CTCCAGCTCTGTTGGAGTCCAGTGCTTCTTGCCTCCATGTGCATTTGTAC ATAAAGGTGCACAAACCCATATGCAAATACACAAAATAAGTATTTTTCTC AACATAATATACTTATATGCTGTTTGAAAAATGTGATAGTGCACCCCAAA CCCACTCATTTTCCACGCCTCCCAGGGCCACACTTCCACCTTTGTTCTCC CACAAATACACCAAGTCCAATTGTATTCCTCATATATTTACTGGAACATG AACAAATTCCTAGTGATAAGCCCCTTAAAGATACCTGATTCCTTTCTCCT CCCCTTACCTCTGCCAGAAGCCATCAACTATGAAAAGCTACATTTCAGCA TCTTTATCACAATTTTTAAGGAATCTCTTCAATGCCTTCCTGTGTAGACC ATTTTCTTTTCCTTTGCTTTTGTTGGGGAGTGCAGTGGGGGCAAGGTTGA AAGGTTGTCACAGAAACTTTGCATGGCTCTCATTCTCAATTATAAGTCTG GAGTCCTCAATACTACTGCAAGAAAGGATTCCTTGCCAATAATAGCCAGT GACAGCATTGATCATAGGCTTCCAAATGGCTTCCTGGGCAGCAGGGACCA CAAACACTAACATGACCTCTGGCTGTAGCA	NNCCCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACAAAACATAATTTCCT GGCTATGCTTTGCATGGGAAGGGCTTTATTTCAAGCATGAGGGAAGAAAT GGGTGGAGGGAAGAATCATCATGGTAAGAGTTTGCTATTTGTAATTTATT TGGTAAGAATGGCTATTTTCTTCTCCTCTGGGTCTCTTACACCACACAAA TGCCATGTCTGTATGCATGGGATGTCTGGAGGCTATCAGAGGCTCAGAGG CACTGTGAGGTGAGTCACATGTTCATTTCATATGTTGTTGCCATTGATGT GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGNTTNNNNNTTTTTTN NNNTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTNTT TTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTT TNNTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTNTTTTTTTTTTTNTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTT TTTTTTTNTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTNNTTTTTTTTT TTTTTTTTTNTTTTTTTTTTTTTTNTNNNNTTTTTTTTTTTTTTTNTTTT TNTTNTTTTTTNNNTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTT TTNTTTNTTTTTTTTG
quality values	Open. Hide. 0 0 3 6 6 6 8 8 8 19 15 17 17 27 28 39 39 37 29 31 30 25 29 27 26 24 30 32 44 26 19 20 17 15 11 10 10 13 14 10 17 13 20 14 9 9 15 19 28 28 47 47 43 23 21 19 20 29 29 37 23 21 9 11 11 12 9 8 8 8 8 8 8 9 9 11 15 23 23 34 41 50 59 53 47 53 53 53 53 53 53 59 59 59 59 57 57 57 53 53 53 42 42 42 37 37 42 48 54 54 54 57 68 68 68 59 59 54 57 57 57 57 57 59 57 57 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 59 59 57 57 57 57 57 57 59 59 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 59 59 59 59 68 68 57 57 57 57 57 57 57 57 57 57 57 59 68 68 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 62 62 62 62 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 68 62 62 62 62 68 68 62 62 62 62 62 59 59 57 57 57 57 57 57 59 68 57 57 57 57 57 57 59 57 59 59 43 44 43 43 43 33 23 23 43 43 59 59 57 59 57 57 57 59 59 59 59 59 59 59 59 59 57 59 57 57 57 57 57 57 57 57 57 57 57 57 59 54 57 52 57 43 43 43 52 52 50 50 43 43 52 57 57 57 57 57 57 57 50 50 37 42 42 57 57 57 57 43 43 43 57 59 59 59 59 59 57 57 57 48 54 54 57 57 57 57 37 43 43 57 44 59 43 43 43 43 37 59 35 35 35 32 34 43 43 43 47 59 57 48 48 54 54 54 54 54 54 48 48 48 48 48 48 59 40 40 28 28 30 32 32 43 48 48 57 48 43 43 43 43 43 41 40 46 41 39 28 28 13 13 13 28 24 31 31 37 37 37 37 28 28 23 31 23 25 25 33 32 39 25 25 14 26 24 30 18 22 11 16 16 28 28 39 59 59 39 39 39 59 47 47 39 39 39 59 43 48 46 46 43 43 41 41 41 36 36 29 30 12 12 12 16 20 12 15 15 28 28 44 59 59 24 25 12 12 11 16 13 32 23 34 18 18 11 15 12 18 16 24 20 20 10 10 19 25 21 30 30 34 28 25 25 32 24 28 15 19 11 24 22 37 31 25 25 31 31 24 20 17 18 14 16 16 16 12 12 12 12 21 25 28 15 14 14 28 28 26 23 20 22 34 28 31 31 31 28 22 21 22 17 18 23 18 32 23 18 18 21 21 19 14 17 18 18 10 10 11 11 11 17 19 12 10 9 9 9 12 10 10 11 9 10 12 28 26 30 27 22 22 27 21 25 21 15 15 10 11 11 15 12 17 17 18 17 17 14 12 12 11 11 11 20 23 28 27 14 12 12 10 8 8 8 9 12 10 12 10 10 10 19 10 10 11 11 10 12 24 21 7 6 6 6 11 10 11 11 11 16 18 20 10 9 9 9 12 13 11 11 11 11	Open. Hide. 0 0 3 6 6 6 8 8 10 9 9 9 9 8 8 9 10 9 8 13 17 16 20 30 30 29 25 30 25 30 27 29 30 25 18 20 10 8 8 8 8 8 8 13 14 9 10 10 22 22 32 31 31 39 31 30 28 28 33 33 59 47 36 25 18 12 9 9 10 10 16 19 37 37 37 28 28 28 28 35 35 36 33 34 34 38 43 53 50 57 50 50 53 53 53 53 53 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 50 50 57 53 68 68 57 57 57 59 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 48 46 46 46 48 57 68 68 68 68 68 68 68 68 57 48 46 46 46 46 46 57 57 68 68 68 68 68 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 59 59 59 59 57 59 54 59 59 68 59 59 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 44 42 30 30 30 44 44 43 43 46 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 48 48 59 59 59 59 59 47 41 25 10 3 0 3 3 0 0 0 0 0 3 8 8 11 8 3 0 0 0 0 3 8 8 11 11 3 0 3 8 8 8 6 6 6 7 10 16 8 7 7 8 10 8 6 6 6 6 6 9 8 8 8 8 8 13 15 11 3 0 3 6 6 6 3 0 3 6 6 8 14 13 14 9 9 10 10 3 0 3 9 8 10 10 8 8 6 6 6 7 7 6 6 6 6 7 7 8 10 7 6 6 6 3 0 3 8 8 19 13 9 8 8 8 12 11 8 9 3 0 0 3 11 7 9 9 15 12 11 8 8 8 8 8 8 10 3 0 3 8 6 6 6 8 11 15 9 9 7 8 8 8 10 10 20 23 28 21 21 21 17 17 12 10 9 9 9 9 9 3 0 3 9 9 11 9 9 9 19 16 15 3 0 3 9 9 13 13 11 18 13 15 15 10 7 7 3 0 3 7 6 6 7 7 9 9 9 9 9 9 9 9 17 22 18 24 11 9 9 9 9 9 9 8 3 0 3 7 7 7 8 10 7 9 9 7 7 8 6 7 3 0 3 6 7 9 10 15 9 9 9 13 8 8 6 8 3 0 0 3 10 10 9 10 10 17 22 28 16 15 15 14 10 8 8 8 3 0 3 7 7 9 7 10 8 8 8 8 8 16 19 3 0 3 0 0 0 0 3 6 7 7 7 6 6 6 7 7 6 6 6 9 3 0 3 7 6 6 3 0 3 3 0 3 7 7 7 7 3 0 0 0 3 8 8 10 10 10 10 11 10 10 12 8 6 6 7 6 6 6 8 8 8 8 8 3 0 3 8 8 8 10 10 9 9 9 9 8 8 3 0 3 8 3 0 3 8 6 9 9 8 10 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no406_f19.g1 MSMg01no406_f19.g1 CHROMAT_FILE:
MSMg01no406_f19.g1 PHD_FILE: MSMg01no406_f19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:38 2005
         (308 letters)



>mm_chr6_141269931_141270638
          Length = 708

 Score =  588 bits (304), Expect = e-172
 Identities = 304/304 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcacaaaacataatttcctggctatgctttgcatgggaagggctttatttcaagcatgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tcacaaaacataatttcctggctatgctttgcatgggaagggctttatttcaagcatgag 407

                                                                       
Query: 61  ggaagaaatgggtggagggaagaatcatcatggtaagagtttgctatttgtaatttattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ggaagaaatgggtggagggaagaatcatcatggtaagagtttgctatttgtaatttattt 347

                                                                       
Query: 121 ggtaagaatggctattttcttctcctctgggtctcttacaccacacaaatgccatgtctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ggtaagaatggctattttcttctcctctgggtctcttacaccacacaaatgccatgtctg 287

                                                                       
Query: 181 tatgcatgggatgtctggaggctatcagaggctcagaggcactgtgaggtgagtcacatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tatgcatgggatgtctggaggctatcagaggctcagaggcactgtgaggtgagtcacatg 227

                                                                       
Query: 241 ttcatttcatatgttgttgccattgatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ttcatttcatatgttgttgccattgatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 167

               
Query: 301 tgtg 304
           ||||
Sbjct: 166 tgtg 163


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 708
Length adjustment: 9
Effective length of query: 299
Effective length of database: 699
Effective search space:   209001
Effective search space used:   209001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information