ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTGATCTTTCCCGACTTTTATCATGAATGGGTGTTGGATTTTGTCAA
ATGCTTTCTCATCATCTAACGAGATGATCATGTGGTTTTTGTCTTTGAGT
TTGTTTATATACTGAATTACATTGATGGATTTCCGTATATTGAACCATCC
CTGCATCCCTGGGATGAAACCTACTTGGTCAGGATGGATGATTGTTTTGA
TGTGTTCTTGGATTCGGTTAGCAAGATCTTTATTGAGGATTTTTGCATCG
ATATTCATAAGGGAAATTGGTCTTATTTTCCTAGGCAAATGGATGGACCT
GGAGGGTATCATCCTGAGTGAGGTAACCCAATCACAAAGGAACTCGCACA
ATATGTACTCACTGATAAGTGGATATTAGCCCAGAAACTTAGGATACCCA
AGATATAAGATACAACTTGCCAAACGCAAGAGATTCAAGAAGAACGAAGA
CCAAAGTGTGGACACTTTACCCTTTCTTAGAAATGGGAACAAAACACCCA
TAGAAGGAATTACAGAGACAAAATTTGGAGCTGTGACGAAAGGATGGACC
ATCTAGTGATTGCCATATACAGGGATCCATCCCATAATCAGCTTCCAAAT
GCTGACACCATTGCATACACTAGCAAGATTTTGCTGAAAGGCCCAGATAT
AACTCTCTCTTGTGAACTATGCTGGGGCCTAGCAACACCGAATGTATGAT
CCCGGTCCCTATTGTATGATCC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAATGCTGATAGGTCTGCACATGA
AAAATCCACAGAAAAAAACCATTTTGCCTGTAATGAAGCTGAGCATCATT
GGACAAAAATCTGAAATAGGTTAACTCTAAAAGAAGGTAGTTACTTTTTA
AAATAAAATTATGTCTATTGATTATGAAGACCAAACTGATCAAATTACCT
CAGTCATCCTAATCACAAATTAGTTGGATAACTTCAAAAAATTTTTCAGC
CCAAAGATTAAGGTATAAAGTACTTTGTTGCATTTGCTTTGTACCTTAAC
TCAAAAAAATTTTTTTTCTAAGTTTGGTGATACAAGGAATCAAAAAAGAA
ATTAGCTGAGATCAGTAACCCTACAATATGAGAACAAATCTTCAGTAATC
GATACACTTTTTTGAGAACTTCTTGTTAATATGAAACCTTGTCCATCCAC
TAAATATATATTTAAAACCCCTGTTGTTGAAAGATGCAAAATCTGGCTTT
TTCTCCTGTAGCATTAATGAACTAAATTAAAAATTATTTCACTAGTTTTT
GAGCACCTTGCAAGCCAAAAAAATATATTGGCATTTTTATCTAATAACTG
GGGGGAGGGGGACCTGAAATAAGTGTAACTGTACTCAATTATATAGGAAA
AATTGCTCCTATATACCTGGAAGTTGGTACTAAAGGCTTCTTCATATACA
ATTCACTTTCTATTATCTTTTACGAAN

Query= MSMg01no409_e12.g1 MSMg01no409_e12.g1 CHROMAT_FILE:
MSMg01no409_e12.g1 PHD_FILE: MSMg01no409_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:35 2005
         (586 letters)



>mm_chr6_13791003_13791995
          Length = 993

 Score = 1079 bits (558), Expect = 0.0
 Identities = 582/594 (97%), Gaps = 9/594 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaatgctgataggtctgcacatgaaaaatccacagaaaaaaaccattttgcctgtaatga 60
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 793 aaatgctgataggtctgcacatgaaaaatccacagaataaaaccattttgcctgtaatga 734

                                                                       
Query: 61  agctgagcatcattggacaaaaatctgaaataggttaactctaaaagaaggtagttactt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 agctgagcatcattggacaaaaatctgaaataggttaactctaaaagaaggtagttactt 674

                                                                       
Query: 121 tttaaaataaaattatgtctattgattatgaagaccaaactgatcaaattacctcagtca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tttaaaataaaattatgtctattgattatgaagaccaaactgatcaaattacctcagtca 614

                                                                       
Query: 181 tcctaatcacaaattagttggataacttcaaaaaatttttcagcccaaagattaaggtat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tcctaatcacaaattagttggataacttcaaaaaatttttcagcccaaagattaaggtat 554

                                                                       
Query: 241 aaagtactttgttgcatttgctttgtaccttaactcaaaaaaa--ttttttttctaagtt 298
           |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||
Sbjct: 553 aaagtactttgttgcatttgctttgtaccttaactcaaaaaaaaattttttttctatgtt 494

                                                                       
Query: 299 tggtgatacaaggaatcaaaaaagaaattagctgagatcagtaaccctacaatatgagaa 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tggtgatacaaggaatcaaaaaagaaattagctgagatcagtaaccctacaatatgagaa 434

                                                                       
Query: 359 caaatcttcagtaatcgatacacttttttgagaacttcttgttaatatgaaaccttgtcc 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 caaatcttcagtaatcgatacacttttttgagaacttcttgttaatatgaaaccttgtcc 374

                                                                       
Query: 419 atccactaaatatatatttaaaacccctgttgttgaaagatgcaaaatctggctttttct 478
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atccactaaatatatctttaaaacccctgttgttgaaagatgcaaaatctggctttttct 314

                                                                       
Query: 479 cctgtagcattaatgaactaaattaaaaattatttcactagtttttgagcaccttgcaag 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cctgtagcattaatgaactaaattaaaaattatttcactagtttttgagcaccttgcaag 254

                                                                 
Query: 539 ccaaaaaaatata------ttggcatttttatctaataactggggggaggggga 586
           ||||||||| |||      |||||||||||||||||||||||||||||||||||
Sbjct: 253 ccaaaaaaa-ataaaaaaattggcatttttatctaataactggggggaggggga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 993
Length adjustment: 10
Effective length of query: 576
Effective length of database: 983
Effective search space:   566208
Effective search space used:   566208
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)