Query= MSMg01no409_n11.b1 MSMg01no409_n11.b1 CHROMAT_FILE:
MSMg01no409_n11.b1 PHD_FILE: MSMg01no409_n11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:21 2005
(443 letters)
>mm_chr6_99360441_99361284
Length = 844
Score = 781 bits (404), Expect = 0.0
Identities = 431/448 (96%), Gaps = 17/448 (3%)
Strand = Plus / Minus
Query: 5 gaattccaggccagtcc-ggctgcagtgagaccctgtctcaaaataaacaaacacataga 63
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gaattccaggccag-cctggctgcagtgagaccctgtctcaaaataaacaaacacataga 472
Query: 64 cagtgacagaaaccaaaaccaagggaggaaagggaagaaaaggggggg-ggtgcagaaaa 122
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 471 cagtgacagaaaccaaaaccaagggaggaaagggaagaaaagggggggtggtgcagaaaa 412
Query: 123 gagcggaatatcagggagaaaaaatgttcctctgaggatcaatgtgtcagtaccctgtgg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gagcggaatatcagggagaaaaaatgttcctctgaggatcaatgtgtcagtaccctgtgg 352
Query: 183 gttgtccttgtggaccagtaaccagtgctgtgtctgattaagaccactttagaagattat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gttgtccttgtggaccagtaaccagtgctgtgtctgattaagaccactttagaagattat 292
Query: 243 gtctagctcatagatggatttggaacatctcagggtttttttt-------tcttagagct 295
||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 291 gtctagctcatagatggatttggaacatctcaggg-------tccaagcctcttagagct 239
Query: 296 ggtcagtagctgtggttttacctggaagtctggcatagctgtgaattcctgggtcctctg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ggtcagtagctgtggttttacctggaagtctggcatagctgtgaattcctgggtcctctg 179
Query: 356 ccagactatggggacctgtgctatgggagaggtccacatctcattgttgttaaatataag 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ccagactatggggacctgtgctatgggagaggtccacatctcattgttgttaaatataag 119
Query: 416 gatctctggtcccagcttctcttttttg 443
||||||||||||||||||||||||||||
Sbjct: 118 gatctctggtcccagcttctcttttttg 91
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 844
Length adjustment: 10
Effective length of query: 433
Effective length of database: 834
Effective search space: 361122
Effective search space used: 361122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no409_n11.g1 MSMg01no409_n11.g1 CHROMAT_FILE:
MSMg01no409_n11.g1 PHD_FILE: MSMg01no409_n11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:21 2005
(163 letters)
>mm_chr6_99151037_99151598
Length = 562
Score = 298 bits (154), Expect = 1e-85
Identities = 160/162 (98%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 1 cacgaagcacactgctgcagaagcagcaaggtccctgaccatgcacttcagtgcagtggg 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacgaagcacactgctgca-aagcagcaaggtccctgaccatgcacttcagtgcagtggg 259
Query: 61 ggaaacatcctatatacctagcaggtctcaagtctgactcaggactgagtgggaagcatt 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggaaacgtcctatatacctagcaggtctcaagtctgactcaggactgagtgggaagcatt 319
Query: 121 tggcatctcaaattacttgaacggaggtggggggatgggtgg 162
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tggcatctcaaattacttgaacggaggtggggggatgggtgg 361
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 163
Length of database: 562
Length adjustment: 8
Effective length of query: 155
Effective length of database: 554
Effective search space: 85870
Effective search space used: 85870
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
