Query= MSMg01no410_j19.b1 MSMg01no410_j19.b1 CHROMAT_FILE:
MSMg01no410_j19.b1 PHD_FILE: MSMg01no410_j19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:24 2005
(511 letters)
>mm_chr6_97907126_97908035
Length = 910
Score = 973 bits (503), Expect = 0.0
Identities = 509/511 (99%), Gaps = 1/511 (0%)
Strand = Plus / Plus
Query: 1 tcattattaaatctaagtacactgtggctgtcttcagacgcaccagaagagagcgtcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcattattaaatctaagtacactgtggctgtcttcagacgcaccagaagagagcgtcaga 260
Query: 61 tctcattaaggatggttgtgagccaccatgtgattgctgagatttgaactcagcaccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcattaaggatggttgtgagccaccatgtgattgctgagatttgaactcagcaccttc 320
Query: 121 agaagagcggtcagtgctcttaaccactgagccatctctccaacccccacttactgaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaagagcggtcagtgctcttaaccactgagccatctctccaacccccacttactgaatt 380
Query: 181 cttaacccttccctgatagtctgtaaaagtgagaatgatcagaaacacccaaagcgaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttaacccttccctgatagtctgtaaaagtgagaatgatcagaaacacccaaagcgaaac 440
Query: 241 aggtgacctgttgtcaacccagctgccaccatttcctgggcagcggctcctgaagccccc 300
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 aggtgaccagttgtcaacccagctgccaccatt-cctgggcagcggctcctgaagccccc 499
Query: 301 atattgactctttaattctcaggtttactaattctgtaaagtaaaaccgtatctctagtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atattgactctttaattctcaggtttactaattctgtaaagtaaaaccgtatctctagtc 559
Query: 361 caattcatgatcactgaacattcttaacttttttagacagaaacaagtacagcctggagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 caattcatgatcactgaacattcttaacttttttagacagaaacaagtacagcctggagt 619
Query: 421 gctcgtttccgttatgtgtcatgcccagtttgccctttaccttcagctatatgctaactg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gctcgtttccgttatgtgtcatgcccagtttgccctttaccttcagctatatgctaactg 679
Query: 481 gttacatgtacacaccgatttttgttgtgtc 511
|||||||||||||||||||||||||||||||
Sbjct: 680 gttacatgtacacaccgatttttgttgtgtc 710
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 910
Length adjustment: 10
Effective length of query: 501
Effective length of database: 900
Effective search space: 450900
Effective search space used: 450900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no410_j19.g1 MSMg01no410_j19.g1 CHROMAT_FILE:
MSMg01no410_j19.g1 PHD_FILE: MSMg01no410_j19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:24 2005
(314 letters)
>mm_chr6_98095556_98096269
Length = 714
Score = 584 bits (302), Expect = e-171
Identities = 302/302 (100%)
Strand = Plus / Minus
Query: 1 aagaaggaactagataaagacttgtcagagttagtcttttatggtgaatgacttctcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagaaggaactagataaagacttgtcagagttagtcttttatggtgaatgacttctcaag 422
Query: 61 actacccaagtaactacagctgatctccaaatatggtagggctgttaggtcaggttgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 actacccaagtaactacagctgatctccaaatatggtagggctgttaggtcaggttgcag 362
Query: 121 tacacttacaaaaaaacttacctatcagttgatgaatgcatgttttcagcagtttagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tacacttacaaaaaaacttacctatcagttgatgaatgcatgttttcagcagtttagaga 302
Query: 181 ctaccttgttgcatttcatcataatagtctctgagtgtttgttggaaagttgctgctaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctaccttgttgcatttcatcataatagtctctgagtgtttgttggaaagttgctgctaaa 242
Query: 241 aataaggcaaagaaaatgacaacgaagaagtaggtaaagacgaggaggaggaggaggagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aataaggcaaagaaaatgacaacgaagaagtaggtaaagacgaggaggaggaggaggagg 182
Query: 301 ag 302
||
Sbjct: 181 ag 180
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
