Query= MSMg01no410_l11.b1 MSMg01no410_l11.b1 CHROMAT_FILE:
MSMg01no410_l11.b1 PHD_FILE: MSMg01no410_l11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:32 2005
(246 letters)
>mm_chr6_92774811_92775456
Length = 646
Score = 468 bits (242), Expect = e-136
Identities = 245/246 (99%)
Strand = Plus / Plus
Query: 1 ctaatgacttgcacaaagataatctctattttaagtgataaattaatcattttaaaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaatgacttgcacaaagataatctctattttaagtgataaattaatcattttaaaaatg 260
Query: 61 ttacttcaatgagaaactatgaagtcataataacaatttgggataagttcatttgcttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacttcaatgagaaactatgaagtcataataacaatttgggataagttcatttgcttaa 320
Query: 121 tgaaccgagcatctattgtgtacatgccatgtgataggaattatattacacacgggagac 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 tgaaccgagcatctattgtgtacatgccatgtgataggaattatatgacacacgggagac 380
Query: 181 acagtgataacaaaattgacatagtccttgacctcagggggcatagagaccagttatggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagtgataacaaaattgacatagtccttgacctcagggggcatagagaccagttatggg 440
Query: 241 aattaa 246
||||||
Sbjct: 441 aattaa 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no410_l11.g1 MSMg01no410_l11.g1 CHROMAT_FILE:
MSMg01no410_l11.g1 PHD_FILE: MSMg01no410_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:32 2005
(466 letters)
>mm_chr6_92965295_92966164
Length = 870
Score = 866 bits (448), Expect = 0.0
Identities = 463/470 (98%), Gaps = 4/470 (0%)
Strand = Plus / Minus
Query: 1 cttacctctctccacgttccaagctactgattctcccactagagctgtgcatataggttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 cttacctctctccacgttccaagctactgattctcccactagagctgtgcatataggttt 611
Query: 61 aatgtgtaccagagtttgacttcgactcctccagtttgtagctatggaaagacttgacta 120
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 610 aatgtataccagagtttgacttcgactcctccagtttgtagctatggaaagatttgacta 551
Query: 121 gagtggaacatatttgctcccctcaccgttctgagtgtccattttcttgggattcaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gagtggaacatatttgctcccctcaccgttctgagtgtccattttcttgggattcaagct 491
Query: 181 gtctgctgtcttttggacagggttcaaatccatattgcactacagttcaattattactga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gtctgctgtcttttggacagggttcaaatccatattgcactacagttcaattattactga 431
Query: 241 acattttccatggcttatcagaactgcatagttggggagaaggccttcctagaagagcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 acattttccatggcttatcagaactgcatagttggggagaaggccttcctagaagagcag 371
Query: 301 gagagagcagactgtgcaaggcaggttctg----cctatgtgcaccgagtgcagcttagc 356
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 370 gagagagcagactgtgcaaggcaggttctgcctacctatgtgcaccgagtgcagcttagc 311
Query: 357 tgctatgacctgcgtggacttagaaactcctgtaagatttctttccaggaagctgagaaa 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgctatgacctgcgtggacttagaaactcctgtaagatttctttccaggaagctgagaaa 251
Query: 417 attgaaagactctaagaatcaattttcatgaattttaagtttggacgtag 466
|||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 250 attgaaagactccaagaatcaattttcatgaattttaagtttggacgtag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 870
Length adjustment: 10
Effective length of query: 456
Effective length of database: 860
Effective search space: 392160
Effective search space used: 392160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
