Query= MSMg01no411_a19.b1 MSMg01no411_a19.b1 CHROMAT_FILE:
MSMg01no411_a19.b1 PHD_FILE: MSMg01no411_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:58 2005
(423 letters)
>mm_chr6_106416312_106417134
Length = 823
Score = 779 bits (403), Expect = 0.0
Identities = 415/419 (99%)
Strand = Plus / Plus
Query: 5 gaattctagcatatcctttaaatcctgaaccagcatgctggcagccaataccaattaggt 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagcacatcctttaaatcctgaaccagcatgctggcagccaataccaattaggt 264
Query: 65 ggggctttgtaggcaactccaaatctttctgcaatcccagccccttaatgatttctcacc 124
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 ggggctttgtaggcaactccaaatctttctgcaatccctgccccttaatgatttctcacc 324
Query: 125 cgggcttggtattttattgtttacaaattgttttcacatgtatggtcccattagaccatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgggcttggtattttattgtttacaaattgttttcacatgtatggtcccattagaccatc 384
Query: 185 aagcttatgaagtgaggggttgttatctctttctcacatgtgagaaaattgaaaattgtg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagcttatgaagtgaggggttgttatctctttctcacatgtgagaaaattgaaaattgtg 444
Query: 245 gcttagagagatgaagtgatctgaagaatattgcagagtccagtggaatatgtctcctcc 304
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 gcttagagagatgaagtgatctgaagaagattgcagagtccagtggaatatgtctcctcc 504
Query: 305 tgagctgtcttgccccattcagcaagaaatgtgcagctgacaaacgtccattataatagg 364
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgagctgccttgccccattcagcaagaaatgtgcagctgacaaacgtccattataatagg 564
Query: 365 ttccagttctgatagtaagcaggaaggcaagaaggaagggagggcagaaaagagagggg 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttccagttctgatagtaagcaggaaggcaagaaggaagggagggcagaaaagagagggg 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_a19.g1 MSMg01no411_a19.g1 CHROMAT_FILE:
MSMg01no411_a19.g1 PHD_FILE: MSMg01no411_a19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:58 2005
(480 letters)
>mm_chr6_106569026_106569906
Length = 881
Score = 922 bits (477), Expect = 0.0
Identities = 480/481 (99%), Gaps = 1/481 (0%)
Strand = Plus / Minus
Query: 1 tatgctataaatattagctagtgcctttttcctttgccccgtgaaacagagtaaacctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatgctataaatattagctagtgcctttttcctttgccccgtgaaacagagtaaacctgc 622
Query: 61 aggcagatgcctatgctactggctcagagaattaataaaccaaagtagttgaagtccaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggcagatgcctatgctactggctcagagaattaataaaccaaagtagttgaagtccaga 562
Query: 121 taaatacagatctacttctaactaatgttctctgactcccaactctccatctttatagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaatacagatctacttctaactaatgttctctgactcccaactctccatctttatagat 502
Query: 181 aagtacactcatgataaaaaggactttcaagatggcagcaaactgtcaacttccaatgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagtacactcatgataaaaaggactttcaagatggcagcaaactgtcaacttccaatgac 442
Query: 241 cctgacatatataattaggtgaacttttttagcttcatgcttaagttataattgaggtaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgacatatataattaggtgaacttttttagcttcatgcttaagttataattgaggtaa 382
Query: 301 atattctttctgaatattttaacttgccttgggctgtcttacttcagagaggaatctaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atattctttctgaatattttaacttgccttgggctgtcttacttcagagaggaatctaca 322
Query: 361 aataggtcagtaaaaaagaatatgaagcaattcatcagaatgcattgagtatcagcagg- 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataggtcagtaaaaaagaatatgaagcaattcatcagaatgcattgagtatcagcagga 262
Query: 420 aaaaaaaaatggtctccaattttaccagtagaaccagggagagcttgggtcaaatttctg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaaaaaatggtctccaattttaccagtagaaccagggagagcttgggtcaaatttctg 202
Query: 480 g 480
|
Sbjct: 201 g 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 881
Length adjustment: 10
Effective length of query: 470
Effective length of database: 871
Effective search space: 409370
Effective search space used: 409370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
