Query= MSMg01no411_k19.b1 MSMg01no411_k19.b1 CHROMAT_FILE:
MSMg01no411_k19.b1 PHD_FILE: MSMg01no411_k19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:48 2005
(614 letters)
>mm_chr6_82445923_82446935
Length = 1013
Score = 1112 bits (575), Expect = 0.0
Identities = 602/611 (98%), Gaps = 1/611 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaatattcttccaactcattcgatatttcaaggatgccactttgttatgcttat 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 ggaattcaatattcttctaactcattcgatatttcaaggatgccactttgttatgcttat 754
Query: 64 tctagaattttgtaagagccacccacagagcatcattttgctgggtttattagtgataca 123
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 tctaaaattttgtaagagccacccacagagcatcattttgctgggtttattagtgataca 694
Query: 124 gggtgcatcattaaaacatatttacatatgaggtctctccagcttaggtgagtatgaata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gggtgcatcattaaaacatatttacatatgaggtctctccagcttaggtgagtatgaata 634
Query: 184 gtgctgcctgagaaggttgctctctgcattcggttcatagatgcatgagctttgctgggg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gtgctgcctgagaaggttgctctctgcattcggttcatagatgcatgagctttgctgggg 574
Query: 244 taattcactatcactgaaggaaatttctggttttgtatagcttctctttctctagatatg 303
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 573 taattcactatcactgaaggaaatttctgggcatgcatagcttctctttctctagatatg 514
Query: 304 attagatcattttacaatgtgattttgcaaattcagattttttttttcctagcagccaac 363
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 513 attagatcattttacaatgtgattttgcaaattcaga-tttttttttcctagcagccaac 455
Query: 364 aaaagttttcattgtttccatctttgtagaacttagaacattcaaattgggtcaagccat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aaaagttttcattgtttccatctttgtagaacttagaacattcaaattgggtcaagccat 395
Query: 424 cagctagtctgagggtatgtttcatgacctccttgtggtttgaatttctgtttttcatgc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cagctagtctgagggtatgtttcatgacctccttgtggtttgaatttctgtttttcatgc 335
Query: 484 acactaaattaagttaaatgtctctttataaaccaattgaacattagaacttactttgta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 acactaaattaagttaaatgtctctttataaaccaattgaacattagaacttactttgta 275
Query: 544 gcgcgcacgtttaatacttagtcttctttctttattctgagctacctgtctttcacaatt 603
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 274 gcgtgcacgtttaatacttagtcttctttctttatcctgagctacctgtctttcacaatt 215
Query: 604 cttcactgaat 614
|||||||||||
Sbjct: 214 cttcactgaat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1013
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1003
Effective search space: 605812
Effective search space used: 605812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_k19.g1 MSMg01no411_k19.g1 CHROMAT_FILE:
MSMg01no411_k19.g1 PHD_FILE: MSMg01no411_k19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:48 2005
(561 letters)
>mm_chr6_82291605_82292565
Length = 961
Score = 1065 bits (551), Expect = 0.0
Identities = 557/559 (99%)
Strand = Plus / Plus
Query: 1 tgagacacaaaaggaccaaacctaaattatcttgatgtagaaagaggcaagacagaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagacacaaaaggaccaaacctaaattatcttgatgtagaaagaggcaagacagaaact 260
Query: 61 aaacacatcgaagactgctatctagcacagagaagcctagaatctgctttttagtccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacacatcgaagactgctatctagcacagagaagcctagaatctgctttttagtccagg 320
Query: 121 ctggccttgatcttgggggtcctcttgccctgatgacttgggtcttaaaaaggcttgcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctggccttgatcttgggggtcctcttgccctgatgacttgggtcttaaaaaggcttgcta 380
Query: 181 cacagtcatgagaacttggaccctaaaacttacacaacaagtggggcaattccaaacatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacagtcatgagaacttggaccctaaaacttacacaacaagtggggcaattccaaacatt 440
Query: 241 tgtaattccatctataaaggccttcacaccctcttctggtcttccatgcgcagactgtgc 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtaattccagctataaaggccttcacaccctcttctggtcttccatgcgcagactgtgc 500
Query: 301 atttacacacacacttgaacatttacacacacataattacttaaagctttaaaaattagt 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 atttacacacacacttgaacatttacacacacataattatttaaagctttaaaaattagt 560
Query: 361 agacagaaagaaatagtaaaggcaatcaataatattaatgaaatgaagaataaaataaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agacagaaagaaatagtaaaggcaatcaataatattaatgaaatgaagaataaaataaca 620
Query: 421 gaataatggattcatgaaagaaacaattggtctttgaaaagacaagatttgagaaactat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaataatggattcatgaaagaaacaattggtctttgaaaagacaagatttgagaaactat 680
Query: 481 tagacaaaccaacccaaagaaagtttttttttaaaagacccaaactaatatgattagaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagacaaaccaacccaaagaaagtttttttttaaaagacccaaactaatatgattagaga 740
Query: 541 gactaagcaggtactatga 559
|||||||||||||||||||
Sbjct: 741 gactaagcaggtactatga 759
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space: 524001
Effective search space used: 524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
