Query= MSMg01no414_j23.b1 MSMg01no414_j23.b1 CHROMAT_FILE:
MSMg01no414_j23.b1 PHD_FILE: MSMg01no414_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:43 2005
(502 letters)
>mm_chr6_120253571_120254472
Length = 902
Score = 748 bits (387), Expect = 0.0
Identities = 412/423 (97%), Gaps = 7/423 (1%)
Strand = Plus / Minus
Query: 1 agtcagtgctcttacctgctgagccatctctccaggcccctgttttgtgttttaaagaca 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 421 agtcagtgctcttacctgctgagccatctcaccaggcccctgttttgtgttttaaagaca 362
Query: 61 caggatgatagagtacaagggcccagcatacgtatctctcatcaccctgccctgaaagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caggatgatagagtacaagggcccagcatacgtatctctcatcaccctgccctgaaagta 302
Query: 121 agacaccaggaaaaatggcagaatcctcaagatagaatgatcttggcggctccaggtcct 180
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 301 agacaccaggaaaaatggcagagtcctcaagatagaatgatcttggcagctccaggtcct 242
Query: 181 ggaatggttctcaacctgtgggtagtcaccaccttgacaaacctctatctccaaaactag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaatggttctcaacctgtgggtagtcaccaccttgacaaacctctatctccaaaactag 182
Query: 241 ttcccttaccagtatcttaa--tgacagttataaagtag---caacaacaacaacaaaaa 295
|||||||||||||| | || ||||||||||||||||| ||||||||||||||||||
Sbjct: 181 ttcccttaccagtagc--aaattgacagttataaagtagcaacaacaacaacaacaaaaa 124
Query: 296 attgtggtggcggtgaggggtgaaagtcaccacaacaggaggaactatattaaaggtctc 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 attgtggtggcggtgaggggtgaaagtcaccacaacaggaggaactatattaaaggtctc 64
Query: 356 agcatcaggaaggttggtgttaggatgaagtcagacctctgtttcctctgggaggtctgc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 agcatcaggaaggttggtgttaggatgaagtcagacctctgtttcctctgggaggtctgc 4
Query: 416 tta 418
|||
Sbjct: 3 tta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_j23.g1 MSMg01no414_j23.g1 CHROMAT_FILE:
MSMg01no414_j23.g1 PHD_FILE: MSMg01no414_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:43 2005
(456 letters)
>mm_chr6_120032595_120033450
Length = 856
Score = 812 bits (420), Expect = 0.0
Identities = 447/456 (98%), Gaps = 1/456 (0%)
Strand = Plus / Plus
Query: 2 ctctgtagaccaggttggccttgaactcatagagacccacctgcctctgcctcctgagta 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctgtagaccaggttggccttgaactcatagagacccacctgcctctgcctcctgagta 260
Query: 62 gtgagattaaagtagtgg-tcaccaccagctgactatattctgttttgttgttgttgctg 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgagattaaagtagtgggtcaccaccagctgactatattctgttttgttgttgttgctg 320
Query: 121 ttgtttaaataatggccatatattacttttctgatcaggaaaaaaaaaagtgactacatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtttaaataatggccatatattacttttctgatcaggaaaaaaaaaagtgactacatg 380
Query: 181 aacatttagaaaatcctcttcacattttacagatgaatgaaaccgaggtaccagatagga 240
|||||||||||||| |||| |||||||| ||||||||||||||| |||||||||||||||
Sbjct: 381 aacatttagaaaattctctccacattttgcagatgaatgaaaccaaggtaccagatagga 440
Query: 241 aatgactcacggaatatcacgtgactaccagtggctttgtgacggagttcaggaaaccac 300
|||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 441 aatgactcacggaagatcacgtgactatcagtggctttgtgacgaagttcaggaaaccac 500
Query: 301 acttccatttcgtaccctgatcaccctggtctgagttagttaccagtagtttttataaca 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 acttccatttcgtaccctgatcaccctggtctgcgttagttaccagtagtttttataaca 560
Query: 361 cgaatcttctgagcatcagttttgtctgggaactctgactgttctgtgaagaaggaagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgaatcttctgagcatcagttttgtctgggaactctgactgttctgtgaagaaggaagtg 620
Query: 421 ttccttcaaagccggggatcagttacgtatactctt 456
||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttccttcaaagccggggatcagttacgtatactctt 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
