Query= MSMg01no415_k22.b1 MSMg01no415_k22.b1 CHROMAT_FILE:
MSMg01no415_k22.b1 PHD_FILE: MSMg01no415_k22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:08 2005
(447 letters)
>mm_chr6_143164951_143165797
Length = 847
Score = 812 bits (420), Expect = 0.0
Identities = 438/444 (98%), Gaps = 2/444 (0%)
Strand = Plus / Plus
Query: 5 gaattctccaggtct-ctgcggtcaggggccccgggcggcacaggttacgtgaatagtct 63
||||||||||||| | |||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 205 gaattctccaggt-tactgcggtcaggggccccgggtgacacaggttacgtgaatagtct 263
Query: 64 cacccaggataaatacagatagcacctttccctcctgcctctcctctcctaatttccagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cacccaggataaatacagatagcacctttccctcctgcctctcctctcctaatttccagt 323
Query: 124 cacagacattgacctcaaatacacatcgatctgagaactcgacgctcaggcacttaggac 183
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 324 cacagacattgacctcaaatacacgtcgatctgagaactcgacgctcaggcacttaggac 383
Query: 184 caactggtttaacctttgtagagctccacaggcctttctgttaagaggctgtgcttttaa 243
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cgactggtttaacctttgtagagctccacaggcctttctgttaagaggctgtgcttttaa 443
Query: 244 aacctaggtcagcttcttgaattctcttttatggcctctaggacccagcctcctttctta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aacctaggtcagcttcttgaattctcttttatggcctctaggacccagcctcctttctta 503
Query: 304 atatttatatttctcctttattaaagacaatacctgttcactatagaaaactaagagtat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atatttatatttctcctttattaaagacaatacctgttcactatagaaaactaagagtat 563
Query: 364 agagaaatcgaaggtgaaattgttgccctatgtaaatgtcatacatgtgcttttcaagtt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agagaaatcgaaggtgaaattgttgccctatgtaaatgtcatacatgtgcttttcaagtt 623
Query: 424 ttcactgcacaagcatctgtgtat 447
||||||||||||||||||||||||
Sbjct: 624 ttcactgcacaagcatctgtgtat 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_k22.g1 MSMg01no415_k22.g1 CHROMAT_FILE:
MSMg01no415_k22.g1 PHD_FILE: MSMg01no415_k22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:08 2005
(445 letters)
>mm_chr6_143298913_143299757
Length = 845
Score = 748 bits (387), Expect = 0.0
Identities = 408/415 (98%)
Strand = Plus / Minus
Query: 31 ggtgatcgaggctcatggccctggccacagacttgagttcaatcctgagacccttcacag 90
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 845 ggtgatcgaggctcatggccctggccacagacttgagttcaatcctaagacccttcacag 786
Query: 91 tagagggagagagctgacccttccaagttgtcttctaacctctacacacgtgatggtgta 150
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 tagagagagagagctgacccttccaagttgtcttctaacctctacacacgtgatggtgta 726
Query: 151 tacacacactcgcacacacacacacacataacacacacgcacacacacaaacataatgca 210
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 725 tacacacactcgcacacacacacacacataacacacatgcacacacacaaacataatgca 666
Query: 211 cacacacacacaaacacacaaaaatatgaacatgaaaattataataaatagaaataaatg 270
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 665 cacacacacacaaacacacaaaaatatgaacatgaaaaccataataaatagaaataaatg 606
Query: 271 tactcttgtgttactagcttgtgtcactcaaacacagagcagtcgaaagagtgatggtgt 330
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tactcttgtgttactaacttgtgtcactcaaacacagagcagtcgaaagagtgatggtgt 546
Query: 331 cccagcagccattgcttcctgtgctgtgctgtagcagtgtgggcacagcaaggccagccc 390
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 545 cccagcagccattgcttcctgtgctgtgctgtagcactgtgggcacagcaaggccagccc 486
Query: 391 tcggggctcacgagcacagcatccttgctgagatctccgcagagacactgcctta 445
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tcggggctcacgagcacagcatccttgctgagatctccgcagagacactgcctta 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
