Query= MSMg01no416_j17.b1 MSMg01no416_j17.b1 CHROMAT_FILE:
MSMg01no416_j17.b1 PHD_FILE: MSMg01no416_j17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:16 2005
(603 letters)
>mm_chr6_63711366_63712368
Length = 1003
Score = 1098 bits (568), Expect = 0.0
Identities = 592/600 (98%)
Strand = Plus / Plus
Query: 1 acacagacaaaataattgatatacacagtcagaaaaaaatcaatttgtgataaaaatgga 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 acacagacaaaataattgatatacatagtcagaaaaaaatcaatttgtgataaaaatgga 260
Query: 61 ggacagaatgttgtggtacttaaatatttacggttttttttcccattttctctatggctt 120
|||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||
Sbjct: 261 ggacagaatgttgtggtacttaaatatttatgttttttttttccattttctctatggctt 320
Query: 121 taaacacttattaaactcaaaggaagctatagtagggttcttcagacatattaaaaataa 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaacatttattaaactcaaaggaagctatagtagggttcttcagacatattaaaaataa 380
Query: 181 ccttgtaaaatcctttctgagaacagtccctatctttctcaatttatccttcattgagtt 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttgtagaatcctttctgagaacagtccctatctttctcaatttatccttcattgagtt 440
Query: 241 tcagcgatgactagctgaagggagtgcttagtgatcggagtaaagtgagtatattgccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagcgatgactagctgaagggagtgcttagtgatcggagtaaagtgagtatattgccag 500
Query: 301 acaggtgattaaagaaagttaaccatgtctttctcagttacttcctctgggctctttatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaggtgattaaagaaagttaaccatgtctttctcagttacttcctctgggctctttatt 560
Query: 361 ctttttcagatgaaatatctcctttcaaatcagggacactgtgcaaaataggaatggatc 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctttttcagatgaaatatcgcctttcaaatcagggacactgtgcaaaataggaatggatc 620
Query: 421 tgagatgacacacatcctaagctcctatcctggctctgatcctttttaactatcagacat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgagatgacacacatcctaagctcctatcctggctctgatcctttttaactatcagacat 680
Query: 481 tagacagtcactgaacttcctgagcctatttcctcgtgtgaaaaatgaaggggctggaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagacagtcactgaacttcctgagcctatttcctcgtgtgaaaaatgaaggggctggaag 740
Query: 541 agaatgatcctgaaattaccctccttttatgctgtaacaatgcagtagcccccttttgtc 600
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 741 agaatgatcctgaaattaccctccttttatgttgtaacaatgcagtagcccccttttgtc 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space: 588849
Effective search space used: 588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_j17.g1 MSMg01no416_j17.g1 CHROMAT_FILE:
MSMg01no416_j17.g1 PHD_FILE: MSMg01no416_j17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:17 2005
(554 letters)
>mm_chr6_63870254_63871206
Length = 953
Score = 1025 bits (530), Expect = 0.0
Identities = 548/554 (98%), Gaps = 1/554 (0%)
Strand = Plus / Minus
Query: 1 ggaaaacaggctggggtcagtaagttgcttctacatagctctcttcactttgaatcactt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 709 ggaaaacaggctggggtcagtaagttgcttctacatagctctcttcactttgaatcgctt 650
Query: 61 ttataattgatgtcttcaattttcattttctcagtttctgctgtcttcacagagcaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ttataattgatgtcttcaattttcattttctcagtttctgctgtcttcacagagcaaaag 590
Query: 121 gccattctttttatttatgaaataacctcttcttcatcctttattttctcatgtgtccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gccattctttttatttatgaaataacctcttcttcatcctttattttctcatgtgtccac 530
Query: 181 ccatctatacttgactcctgatgatcctatgtgcataggctagtcagcctgtgtccttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 529 ccatctatacttgactcctgatgatcctatgtgcataggctagtcagcctgagtccttgg 470
Query: 241 ttcttaggaaacaactgaaatttgaataaagctataatgtaaatgaattgcttttcttgt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gtcttaggaaacaactgaaatttgaataaagctataatgtaaatgaattgcttttcttgt 410
Query: 301 atattgagttgtcatgaggtagttttaatattataagagtcggaagatctggtcagacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 atattgagttgtcatgaggtagttttaatattataagagtcggaagatctggtcagacaa 350
Query: 361 gtgaatcagaaaggtagtttggtccctaaacttaacaaaaccccaccagtcaactacaaa 420
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 349 gtgaatcaggaaggtagtttggtccctaaacttaacaaa-ccccaccagtcaactacaaa 291
Query: 421 ttaaacaaggaagaagggggttagaaaaagaggaagaagcagaagaaagggaactttaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttaaacaaggaagaagggggttagaaaaagaggaagaagcagaagaaagggaactttaac 231
Query: 481 ttttaattctgagtgtttgacccattagatacacacatgcaaacaccacacacacacaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ttttaattctgagtgtttgacccattagatacacacatgcaaacaccacacacacacaca 171
Query: 541 cacacacacacaca 554
|||||||||||||
Sbjct: 170 tacacacacacaca 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 8
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 953
Length adjustment: 10
Effective length of query: 544
Effective length of database: 943
Effective search space: 512992
Effective search space used: 512992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|