Query= MSMg01no417_f18.b1 MSMg01no417_f18.b1 CHROMAT_FILE:
MSMg01no417_f18.b1 PHD_FILE: MSMg01no417_f18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:13 2005
(509 letters)
>mm_chr6_36696217_36697125
Length = 909
Score = 944 bits (488), Expect = 0.0
Identities = 503/508 (99%)
Strand = Plus / Plus
Query: 1 aaattaactgtttcattaatggcttttcaattttatttcaaaatagatttcactttcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaattaactgtttcattaatggcttttcaattttatttcaaaatagatttcactttcctg 260
Query: 61 gattaaaaactaccttaaatacagcgttatgatgtagatgattgtgagaatctgaaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gattaaaaactaccttaaatacagcgttatgatgtagatgattgtgagaatctgaaaatt 320
Query: 121 ctcactgagaaagcacaactctggagaaaactttctgagcaagcaatgagtgatgatcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcactgagaaagcacaactctggagaaaactttctgagcaagcaatgagtgatgatcct 380
Query: 181 ccctagtcttaataaagtggggtgatgaagaggtcagaagtcgttttgactaagccaata 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 ccctagtcttaataaagtggggtgatgaagaggtcagaagtcgttctgactaagccaata 440
Query: 241 tcttactatcttagcttttacgggagtgtaaaaagattaaaggtttaaaagaagagtaaa 300
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 441 tcttactatcttagcttttacaggagtgtaaaaagaataaaggtttaaaagaagagtaaa 500
Query: 301 agaaatggaatgattaaaattacccaagtgcatcgaacagtacttaatagtaagaccatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaaatggaatgattaaaattacccaagtgcatcgaacagtacttaatagtaagaccatt 560
Query: 361 tgagtgcttcaaacaatactcaactaacttttggcacatttctggtacatagatacatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgagtgcttcaaacaatactcaactaacttttggcacatttctggtacatagatacatga 620
Query: 421 gtaattatgcagatagcagcttgcatgtgatatatgtagagttggcggtttatcatcagc 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 gtaattatgcagatagcagcttgcatgtgatatatgtagagttggctgtttatcatcagc 680
Query: 481 atcaagtaaaaccaaaagctttctttgc 508
||||||||||||||||||||||| ||||
Sbjct: 681 atcaagtaaaaccaaaagctttccttgc 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_f18.g1 MSMg01no417_f18.g1 CHROMAT_FILE:
MSMg01no417_f18.g1 PHD_FILE: MSMg01no417_f18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:13 2005
(412 letters)
>mm_chr6_36867127_36867938
Length = 812
Score = 605 bits (313), Expect = e-177
Identities = 343/353 (97%), Gaps = 3/353 (0%)
Strand = Plus / Minus
Query: 1 aaagatggaggaccctctgcactgtttgccctgtcagagttcctcgtagactgaagcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 352 aaagatggaggaccctctgcactgtttgccctgtcagagttcctcgtagaccgaagcatt 293
Query: 61 tgagttaaagaaaaacaagatacaagtaactgtgtggctggaaggccttaggggcactgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tgagttaaagaaaaacaagatacaagtaactgtgtggctggaaggccttaggggcactgg 233
Query: 121 gatagcagtagccaaagcatggaaaggatgac-ttttttccatattctttta-ttgggta 178
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 232 gatagcagtagccaaagcatggaaaggatgactttttttccatattcttttatttgggta 173
Query: 179 tttatttcaattacatttccaatgctatcccaaaagtcccccacacgctccccaacccac 238
|||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||
Sbjct: 172 tttatttcaattacatttccaatgctatcccaaaagtccccc-cacactcccccacccac 114
Query: 239 tcccctacccacccactcccacttcttggccctggcgttccccgtactgaggcatataaa 298
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 113 tcccctacccacccactcccacttcttggccctggcattccccgtactgaggcatataaa 54
Query: 299 gtttgcacgaccaatgggcctttctttccaatgatggccgactaggccatctt 351
||||||||||||||||||||| |||||||| ||||||| ||||||||||||||
Sbjct: 53 gtttgcacgaccaatgggcctctctttccactgatggctgactaggccatctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
