Query= MSMg01no418_l05.b1 MSMg01no418_l05.b1 CHROMAT_FILE:
MSMg01no418_l05.b1 PHD_FILE: MSMg01no418_l05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:58 2005
(505 letters)
>mm_chr6_88343634_88344538
Length = 905
Score = 955 bits (494), Expect = 0.0
Identities = 500/502 (99%)
Strand = Plus / Minus
Query: 4 ggaattcagtcccagtccggtgtccgtacctttgagtgggtggcctctggatgctgcttc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ggaattcagtcccagtccggtgtccgtacctttgagtgggtggcctctggatgctgcttc 646
Query: 64 ttgcaccttcatgccatgctggcatgggttgtattctctgggacttcccgtgtgtgcttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ttgcaccttcatgccatgctggcatgggttgtattctctgggacttcccgtgtgtgcttt 586
Query: 124 cagaggccagggtgtgaactgaagtggcctttgggctacattgtcacggatccccttcct 183
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 585 cagaggccagggtgtgaactgaagtggcctttgggctgcattgtcacggatccccttcct 526
Query: 184 cctttcatcgtgccgggtgctgtgctgtactagttcatagcatgagcaggaaaaggtcca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 cctttcatcgtgccgggtgctgtgctgtactagttcatagcatgagcaggaaaaggtcca 466
Query: 244 atcacctggagcagatgcttacagagcctctgtatgagggccgctgcctgttgtcaggaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atcacctggagcagatgcttacagagcctctgtatgagggccgctgcctgttgtcaggaa 406
Query: 304 gtatatagctgtgggaagagatgccaaggaagatgtagaacaagtttctccctgtcacca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gtatatagctgtgggaagagatgccaaggaagatgtagaacaagtttctccctgtcacca 346
Query: 364 gtgccagcctacatggtagatgggttcattcgtggcacatgctctagagcactgcattgc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gtgccagcctacatggtagatgggttcattcgtggcacatgctctagagcactgcattgc 286
Query: 424 catcttccctgtgattcctggtccagccaacttcctttccctggcacagtggtagccacc 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tatcttccctgtgattcctggtccagccaacttcctttccctggcacagtggtagccacc 226
Query: 484 tcccaaatagtctccctgcaac 505
||||||||||||||||||||||
Sbjct: 225 tcccaaatagtctccctgcaac 204
Score = 58.7 bits (30), Expect = 9e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 57 ctgcttcttgcaccttcatgccatgctggc 86
||||||||||||||||||||||||||||||
Sbjct: 57 ctgcttcttgcaccttcatgccatgctggc 28
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_l05.g1 MSMg01no418_l05.g1 CHROMAT_FILE:
MSMg01no418_l05.g1 PHD_FILE: MSMg01no418_l05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:58 2005
(458 letters)
>mm_chr6_88133592_88134449
Length = 858
Score = 814 bits (421), Expect = 0.0
Identities = 452/467 (96%), Gaps = 9/467 (1%)
Strand = Plus / Plus
Query: 1 ataacaatcctcctgcctctgcctctgcctctgcctcctaagttctgggttaaaggtatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataacaatcctcctgcctctgcctctgcctctgcctcctaagttctgggttaaaggtatg 260
Query: 61 tgcaccatggcctacagtcttctagatctttattgcctctgtgtgttgacactaaaggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcaccatggcctacagtcttctagatctttattgcctctgtgtgttgacactaaaggtc 320
Query: 121 ctttacatctttgtaatatagcctgcatcaatgcctgagccacagagatggttcagtcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttacatctttgtaatatagcctgcatcaatgcctgagccacagagatggttcagtcat 380
Query: 181 caatgagttgcataggtgtagctcagttgacaggtgtttgcctaccttgcacaaagctct 240
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 381 caatgagttgcataggtgtagctcaattgataggtgtttgcctaccttgcacaaagctct 440
Query: 241 gtgtttaaaccctggcattttataaaaccaggtgcctatcttagtgaaccaccaagttca 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtttaaaccctgacattttataaaaccaggtgcctatcttagtgaaccaccaagttca 500
Query: 301 ttggagtactctataggatcagcggtgactcggaggccgctgaatcacagaaaagcccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttggagtactctataggatcagcggtgactcggaggccgctgaatcacagaaaagcccag 560
Query: 361 cccataaaaaagcctccac--ccccccac-------cacaaacacacacatgaataacag 411
||||||||||| || || | |||||||| ||||||||||||||||||||||||
Sbjct: 561 cccataaaaaaacccccccgcccccccacacacacacacaaacacacacatgaataacag 620
Query: 412 aattattaaaactgcacacaggagctccccacatagactgcaggctg 458
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aattattaaaactgcacacaggagctccccacatagactgcaggctg 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
