Query= MSMg01no419_n01.b1 MSMg01no419_n01.b1 CHROMAT_FILE:
MSMg01no419_n01.b1 PHD_FILE: MSMg01no419_n01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:28 2005
(423 letters)
>mm_chr6_98586540_98587363
Length = 824
Score = 774 bits (400), Expect = 0.0
Identities = 418/424 (98%), Gaps = 1/424 (0%)
Strand = Plus / Minus
Query: 1 gcctttactcctgtggaaagaagatatttcagagaaggaaaagaaaatttagtctttagt 60
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 624 gcctttactcctgtggaaagaagatatttcagagagggaaaagaaaatttggtctttagt 565
Query: 61 atttttgtgatctgaattccagaaacatggggatgcatcttgtctcctccacagacaaac 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 attttcgtgatctgaattccagaaacatggggatgcatcttgtctcctccacagacaaac 505
Query: 121 agtggcttcagcttcaccaagcagcagaagcccataccttcattatcttacctcagtgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agtggcttcagcttcaccaagcagcagaagcccataccttcattatcttacctcagtgtc 445
Query: 181 atatgaggacagaattggagagtttcggaagccacggccacccacaggagagagtagact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atatgaggacagaattggagagtttcggaagccacggccacccacaggagagagtagact 385
Query: 241 gccctgcttcaaccgtgagaggagagaaacgaagcaagcaagttagcactcccttaataa 300
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 384 gccctgctgcaaccgtgagaggagagaaacgaagcaagaaagttagcactcccttaataa 325
Query: 301 tcttca-ttttttattcatttattatatgtcagggattatgcagagcataatgagcccaa 359
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcttcatttttttattcatttattatatgtcagggattatgcagagcataatgagcccaa 265
Query: 360 tggtgacccaatatagatgagctgttttgctctggaggcacctagaaaatcacccaagct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tggtgacccaatatagatgagctgttttgctctggaggcacctagaaaatcacccaagct 205
Query: 420 cctg 423
||||
Sbjct: 204 cctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 824
Length adjustment: 9
Effective length of query: 414
Effective length of database: 815
Effective search space: 337410
Effective search space used: 337410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_n01.g1 MSMg01no419_n01.g1 CHROMAT_FILE:
MSMg01no419_n01.g1 PHD_FILE: MSMg01no419_n01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:28 2005
(552 letters)
>mm_chr6_98434969_98435920
Length = 952
Score = 1052 bits (544), Expect = 0.0
Identities = 550/552 (99%)
Strand = Plus / Plus
Query: 1 tttatctttgtaaggtgccttacttcatagcaaaataaaactttgaaaggcacagctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttatctttgtaaggtgccttacttcatagcaaaataaaactttgaaaggcacagctgcc 260
Query: 61 tctctccccgctactgtatgcttccaaggcagctttgctttggtgttgagggttgctcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctctccccgctactgtatgcttccaaggcagctttgctttggtgttgagggttgctcta 320
Query: 121 ggctggcgttctactagagataaagagaaatagcacacaaatctccttcattttcctcaa 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 ggctggcgttctactagagataaagagaaatagcacacaaatcgccttcattttcctcaa 380
Query: 181 tgaaagatatttcctacttttacttctctatctccaccttgacttgtcttttcttttcta 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 tgaaagatatttcctacttttacttctctatctctaccttgacttgtcttttcttttcta 440
Query: 241 ctcagccacacttcctttgagccaagtccacaaagcgccccctcacctccccagcatcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcagccacacttcctttgagccaagtccacaaagcgccccctcacctccccagcatcca 500
Query: 301 ttccctgaagcatcccagagcagtgggggtaacatgagttatgctgcaaagccttccact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttccctgaagcatcccagagcagtgggggtaacatgagttatgctgcaaagccttccact 560
Query: 361 ggagccgtactctagccatctatttgaataaatgagttcataaggaaaaattcagtgtta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggagccgtactctagccatctatttgaataaatgagttcataaggaaaaattcagtgtta 620
Query: 421 atttcaattcggaagcaattatgcaagatttaaccaatgccttttaaattaaagatttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atttcaattcggaagcaattatgcaagatttaaccaatgccttttaaattaaagatttcc 680
Query: 481 gtacttattctggctaaaataaaactacgattttcatttttcaaaactaaatacagcccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtacttattctggctaaaataaaactacgattttcatttttcaaaactaaatacagcccg 740
Query: 541 tgagaggacggc 552
||||||||||||
Sbjct: 741 tgagaggacggc 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space: 510564
Effective search space used: 510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
