ATATTTCCTCTATTTCCCCACTTTTCTTTTCTTCCACCTATTTTCCTTTT
CTACCTCCAAATAACTATCCCTATTAACAAATGATACCTTCCCTTATAAT
CTTCTTTTTTTCTCCTCCACCCAATTTCCAAATCTACAGCCCCTTCTAAA
TACACTTTCTTATTTTTTCCCCCCCCAATTATCAACGTTACCCATCTATC
ACCCCCAATTACCCCTTTACAAGCAACTTCCATTATCTTATATATTGTCC
TACCCTTTTTTTTCCCCCCCCCTTTTTTATAACCCTCCCCCCCCCCTCAA
ATTTTAAACCACCTTTTTTTTTATTATCCCCGTTCTAATTACAAACTCAG
CAAATCCACCAATTAATATTTTTTCTGTAAAATGTCTCACAACCAATTCA
ATTTCAACTTATGTCCACCTCCCCCTTATATTCACCTCCATTATTACTAT
AATCCCCCTCAATTTCCATAACTTCTTTTTCCCCTCCACCTTTCCCCTTT
TTTTTTTACTTACTTATTACCCCTATTTTTTACACCCTCTTTCCTTCCTT
ATTCCCCTTATTTACTCCTCCCCCAATATTTCTTTTCCCCTTTACAAAAA
ACCCCCTTTTAAATTCACTTCCATCCCACTCTCTACCCCCTTAAATATTC
CCCATTTTCCTTCCCTTATTTTCCCCCTTACTTTTAACCTTTTTCATTTT
TTTCTCTTTTTTCCCTTTCGCCTATTTTTACCCCCCCCAATTTCCACTTC
TATTCCACCTCTTTACCCTATTATCCCAAATAN

ATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGGTGCAGAAAGAGTTAATCGAGGGGC
AGGATGTTACAGGGGCATAAGGCTCCAGTCTGCATGAGTGGGAACCAACA
TGGTTTAATCATTCTTCAAGGGCCCTCGGTGCACTGACTTCAAAAATAAT
AATGGGTCCTGAGATACTCTCAGGATTATGTTCCCAGTCTTTGTAACTAA
CTATAAGCTGTTTAAAAAAAAAAACAGGAATGAGAACCAAAGCACCATGT
TCCCCCACTTTCAAGCGACACATGCACGGTACAGGCAACCTATGGGTGCA
AAACACAAGGGCACGAGAGACTTTGGGGTGGAGTTTGTGGCAGAAGACCT
ATTTGAGCTGTCTGAACCTTTATGAAAGATGTTTCTGTGAGAGTAGTTTA
TGGACATTCATGCCATAAGATATTTCCAAAAACAAGTTAGTTAGGTTAAA
CCTGGCATATGATATTCACATCTGGAATTTTCTCCACACATATAAGCAGT
TGGAAGGCTCAGAGACATCTTTCATGCAAGAAAGCAATTTAATCTCTCTC
TCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCTCTC
CTTCTCTCTCTCTCTCTCTTTCTGTGTTACTCCCCCGGTTTTCATGCTAG
TGTTTGTTTGTTTGACCTTT

Query= MSMg01no420_b02.g1 MSMg01no420_b02.g1 CHROMAT_FILE:
MSMg01no420_b02.g1 PHD_FILE: MSMg01no420_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:47 2005
         (533 letters)



>mm_chr6_92872721_92873651
          Length = 931

 Score =  971 bits (502), Expect = 0.0
 Identities = 524/532 (98%), Gaps = 4/532 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtgcagaaagagttaatcgaggggcaggatgttacaggggcataaggctccagtctgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtgcagaaagagttaatcgaggggcaggatgttacaggggcataaggctccagtctgc 260

                                                                       
Query: 61  atgagtgggaaccaacatggtttaatcattcttcaagggccctcggtgcactgacttcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 atgagtgggaaccaacatggtttaatcattcttcaagggccctcggtgcgctgacttcaa 320

                                                                       
Query: 121 aaataataatgggtcctgagatactctcaggattatgttcccagtctttgtaactaacta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaataataatgggtcctgagatactctcaggattatgttcccagtctttgtaactaacta 380

                                                                       
Query: 181 taagctgtttaaaaaaaaaaacaggaatgagaaccaaagcaccatgttcccccactttca 240
           |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagctgtttaaaaaaaaa--caggaatgagaaccaaagcaccatgttcccccactttca 438

                                                                       
Query: 241 agcgacacatgcacggtacaggcaacctatgggtgcaaaacacaagggcacgagagactt 300
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agtgacacatgcacggtacaggcaacctatgggtgcaaaacacaagggcacgagagactt 498

                                                                       
Query: 301 tggggtggagtttgtggcagaagacctattt-gagctgtctgaacctttatgaaagatgt 359
           ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 499 tggggtggagtttgtggcagaagacctatttcg-gctgtctgaacctttatgaaagatgt 557

                                                                       
Query: 360 ttctgtgagagtagtttatggacattcatgccataagatatttccaaaaacaagttagtt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ttctgtgagagtagtttatggacattcatgccataagatatttccaaaaacaagttagtt 617

                                                                       
Query: 420 aggttaaacctggcatatgatattcacatctggaattttctccacacatataagcagttg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 618 aggttaaacctggcatatgatattcacatctggaattttctccacacatataagcagttc 677

                                                               
Query: 480 gaaggctcagagacatctttcatgcaagaaagcaatttaatctctctctctc 531
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 678 gaaggctcagagacatctttcatgcaagaaagcaatttaatatctctctctc 729


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 931
Length adjustment: 10
Effective length of query: 523
Effective length of database: 921
Effective search space:   481683
Effective search space used:   481683
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)