MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-420F02
Chromosome	6 (Build37)
Map Location	49,542,039 - 49,542,482
singlet/doublet	singlet
Overlap gene	LOC666210
Upstream gene	Repin1, Zfp775, AI854703, Gimap8, LOC100040560, Gimap9, Gimap4, Gimap6, Gimap7, LOC100041450, Gimap1, Gimap5, Gimap3, Tmem176b, Tmem176a, EG666105, Abp1, 1600015I10Rik, LOC100040589, Doxl2, Svs1, Gpnmb, LOC666011, Igf2bp3, LOC100040626, Tra2a, Ccdc126, D330028D13Rik, Stk31, LOC384383
Downstream gene	Npy, LOC100041653, LOC624524, Mpp6, Dfna5h, LOC100041681, Osbpl3, Cycs, 4921507P07Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Repin1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58887 MGI:1889817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 6 mRNAs

name	Zfp775 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243372 MGI:2683557
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI854703 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243373 MGI:2141510
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 32 ESTs

name	Gimap8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243374 MGI:2685303
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100040560 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040560
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Gimap9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:317758 MGI:3511744
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gimap4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107526 MGI:1349656
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gimap6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231931 MGI:1918876
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gimap7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231932 MGI:1349657
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041450 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041450
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	Gimap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16205 MGI:109368
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gimap5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:317757 MGI:2442232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gimap3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83408 MGI:1932723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem176b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65963 MGI:1916348
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem176a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66058 MGI:1913308
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666105 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666105 MGI:3643446
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Abp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76507 MGI:1923757
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1600015I10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69761 MGI:1917011
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040589 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040589
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Doxl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243376 MGI:3618290
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Svs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243377 MGI:2682321
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpnmb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93695 MGI:1934765
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666011 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666011
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 7 Proteins pseudo : _no_value

name	Igf2bp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140488 MGI:1890359
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040626 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040626
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Tra2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101214 MGI:1933972
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc126 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57895 MGI:1889376
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D330028D13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231946 MGI:2442161
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stk31 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77485 MGI:1924735
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC384383 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384383
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC666210 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666210
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Npy (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109648 MGI:97374
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041653 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041653
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC624524 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs

name	Mpp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56524 MGI:1927340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dfna5h (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54722 MGI:1889850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041681 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Osbpl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71720 MGI:1918970
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cycs (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13063 MGI:88578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921507P07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70821 MGI:1918071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Repin1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120952910 GeneID:58887 MGI:1889817
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : replication initiator 1 transcript_id : NM_001079901.1

name	Repin1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120953023 GeneID:58887 MGI:1889817
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : replication initiator 1 transcript_id : NM_001079902.1

name	Repin1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120953132 GeneID:58887 MGI:1889817
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : replication initiator 1 transcript_id : NM_001079903.1

name	Repin1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120953071 GeneID:58887 MGI:1889817
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : replication initiator 1 transcript_id : NM_001079904.1

name	Repin1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120953033 GeneID:58887 MGI:1889817
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : replication initiator 1 transcript_id : NM_175099.3

name	Repin1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120953067 GeneID:58887 MGI:1889817
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : replication initiator 1 transcript_id : NM_001079905.1

name	Zfp775 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129816 GeneID:243372 MGI:2683557
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 775 transcript_id : NM_173429.2

name	Gimap8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116686117 GeneID:243374 MGI:2685303
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase, IMAP family member 8 transcript_id : NM_001077410.1

name	Gimap8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56549089 GeneID:243374 MGI:2685303
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase, IMAP family member 8 transcript_id : NM_212486.2

name	Gimap9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:57863244 GeneID:317758 MGI:3511744
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase, IMAP family member 9 transcript_id : NM_174960.2

name	Gimap4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56549086 GeneID:107526 MGI:1349656
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase, IMAP family member 4 transcript_id : NM_174990.3

name	Gimap4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56549087 GeneID:107526 MGI:1349656
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase, IMAP family member 4 transcript_id : NM_175048.2

name	Gimap6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:57863243 GeneID:231931 MGI:1918876
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase, IMAP family member 6 transcript_id : NM_153175.3

name	Gimap7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56549088 GeneID:231932 MGI:1349657
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase, IMAP family member 7 transcript_id : NM_146167.3

name	LOC100041450 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255144 GeneID:100041450
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical protein LOC100041450 transcript_id : XM_001476443.1

name	Gimap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56549084 GeneID:16205 MGI:109368
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase, IMAP family member 1 transcript_id : NM_008376.3

name	Gimap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56549085 GeneID:16205 MGI:109368
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase, IMAP family member 1 transcript_id : NM_175860.2

name	Gimap5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111161512 GeneID:317757 MGI:2442232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase, IMAP family member 5 transcript_id : NM_175035.5

name	Gimap3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:57863241 GeneID:83408 MGI:1932723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase, IMAP family member 3 transcript_id : NM_031247.3

name	Tmem176b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372371 GeneID:65963 MGI:1916348
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 176B transcript_id : NM_023056.3

name	Tmem176a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353616 GeneID:66058 MGI:1913308
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 176A transcript_id : NM_025326.3

name	EG666105 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255146 GeneID:666105 MGI:3643446
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG666105 transcript_id : XM_981633.2

name	Abp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22095012 GeneID:76507 MGI:1923757
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : amiloride binding protein 1 (amine oxidase, copper-containing) transcript_id : NM_029638.1

name	1600015I10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486896 GeneID:69761 MGI:1917011
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1600015I10 gene transcript_id : NM_001081273.1

name	Doxl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71725388 GeneID:243376 MGI:3618290
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : diamine oxidase-like protein 2 transcript_id : NM_001029987.1

name	Svs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379844 GeneID:243377 MGI:2682321
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : seminal vesicle secretory protein 1 transcript_id : NM_172888.2

name	Gpnmb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371734 GeneID:93695 MGI:1934765
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycoprotein (transmembrane) nmb transcript_id : NM_053110.3

name	Igf2bp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542991 GeneID:140488 MGI:1890359
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin-like growth factor 2 mRNA binding protein 3 transcript_id : NM_023670.2

name	LOC100040626 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255128 GeneID:100040626
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100040626 transcript_id : XM_001475004.1

name	Tra2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111160868 GeneID:101214 MGI:1933972
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transformer 2 alpha homolog (Drosophila) transcript_id : NM_198102.2

name	Ccdc126 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347233 GeneID:57895 MGI:1889376
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 126 transcript_id : NM_175098.3

name	D330028D13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375544 GeneID:231946 MGI:2442161
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D330028D13 gene transcript_id : NM_172727.2

name	Stk31 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31044415 GeneID:77485 MGI:1924735
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine threonine kinase 31 transcript_id : NM_029916.1

name	Npy (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27754168 GeneID:109648 MGI:97374
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuropeptide Y transcript_id : NM_023456.2

name	LOC100041653 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255152 GeneID:100041653
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041653 transcript_id : XM_001477005.1

name	LOC624524 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94377369 GeneID:624524
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs product : hypothetical LOC624524 transcript_id : XM_898388.2

name	Mpp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9910473 GeneID:56524 MGI:1927340
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) transcript_id : NM_019939.1

name	Dfna5h (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350022 GeneID:54722 MGI:1889850
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : deafness, autosomal dominant 5 homolog (human) transcript_id : NM_018769.2

name	LOC100041681 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255156 GeneID:100041681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100041681 transcript_id : XM_001477075.1

name	Osbpl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802870 GeneID:71720 MGI:1918970
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oxysterol binding protein-like 3 transcript_id : NM_027881.2

name	Cycs (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370730 GeneID:13063 MGI:88578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome c, somatic transcript_id : NM_007808.4

name	4921507P07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347533 GeneID:70821 MGI:1918071
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921507P07 gene transcript_id : NM_027564.2

name	Repin1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120952911 GeneID:58887 MGI:1889817
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 note : zinc finger protein 464 (RIP60) product : replication initiator 1 protein_id : NP_001073370.1

name	Repin1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120953024 GeneID:58887 MGI:1889817
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 note : zinc finger protein 464 (RIP60) product : replication initiator 1 protein_id : NP_001073371.1

name	Repin1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120953133 GeneID:58887 MGI:1889817
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 note : zinc finger protein 464 (RIP60) product : replication initiator 1 protein_id : NP_001073372.1

name	Repin1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120953072 GeneID:58887 MGI:1889817
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 note : zinc finger protein 464 (RIP60) product : replication initiator 1 protein_id : NP_001073373.1

name	Repin1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120953068 GeneID:58887 MGI:1889817
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 note : zinc finger protein 464 (RIP60) product : replication initiator 1 protein_id : NP_001073374.1

name	Repin1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120953034 GeneID:58887 MGI:1889817
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 note : zinc finger protein 464 (RIP60) product : replication initiator 1 protein_id : NP_780308.2

name	Zfp775 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734126 CCDS:CCDS20107.1 GeneID:243372 MGI:2683557
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger protein 775 protein_id : NP_775605.1

name	Gimap8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116686118 GeneID:243374 MGI:2685303
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA] codon_start : 1 note : immune-associated nucleotide-binding protein 9; immunity-associated protein 8 product : GTPase, IMAP family member 8 protein_id : NP_001070878.1

name	Gimap8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059011 CCDS:CCDS20108.1 GeneID:243374 MGI:2685303
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA] codon_start : 1 note : immune-associated nucleotide-binding protein 9; immunity-associated protein 8 product : GTPase, IMAP family member 8 protein_id : NP_997651.1

name	Gimap9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28144914 CCDS:CCDS20109.1 GeneID:317758 MGI:3511744
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA] codon_start : 1 note : immune associated nucleotide family member product : GTPase, IMAP family member 9 protein_id : NP_777620.1

name	Gimap4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28416440 CCDS:CCDS20110.1 GeneID:107526 MGI:1349656
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; immune associated nucleotide 1 product : GTPase, IMAP family member 4 isoform a protein_id : NP_778155.2

name	Gimap4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28416442 GeneID:107526 MGI:1349656
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; immune associated nucleotide 1 product : GTPase, IMAP family member 4 isoform b protein_id : NP_778213.1

name	Gimap6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346632 CCDS:CCDS20111.1 GeneID:231931 MGI:1918876
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA] codon_start : 1 note : immune-associated nucleotide 6; immune associated nucleotide 6 product : GTPase, IMAP family member 6 protein_id : NP_694815.1

name	Gimap7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122705 CCDS:CCDS20112.1 GeneID:231932 MGI:1349657
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA] codon_start : 1 note : immune associated nucleotide 3 product : GTPase, IMAP family member 7 protein_id : NP_666279.1

name	LOC100041450 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255145 GeneID:100041450
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476493.1

name	Gimap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28559037 CCDS:CCDS20113.1 GeneID:16205 MGI:109368
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : immune associated nucleotide family member; immunity-associated protein, 38 kDa product : GTPase, IMAP family member 1 protein_id : NP_032402.2

name	Gimap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28559035 CCDS:CCDS20113.1 GeneID:16205 MGI:109368
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : immune associated nucleotide family member; immunity-associated protein, 38 kDa product : GTPase, IMAP family member 1 protein_id : NP_787056.1

name	Gimap5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27923913 CCDS:CCDS20114.1 GeneID:317757 MGI:2442232
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : GTPase, IMAP family member 5 protein_id : NP_778200.1

name	Gimap3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28144918 CCDS:CCDS20115.1 GeneID:83408 MGI:1932723
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005741 - mitochondrial outer membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA] [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : immune associated nucleotide 4 product : GTPase, IMAP family member 3 protein_id : NP_112537.2

name	Tmem176b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12746434 CCDS:CCDS20116.1 GeneID:65963 MGI:1916348
definition	codon_start : 1 product : LR8 protein protein_id : NP_075543.1

name	Tmem176a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560270 GeneID:66058 MGI:1913308
definition	codon_start : 1 exception : mismatches in translation note : kidney expressed gene 2 product : hepatocellular carcinoma-associated antigen 112 protein_id : NP_079602.3

name	EG666105 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94377362 GeneID:666105 MGI:3643446
definition	codon_start : 1 product : hypothetical protein protein_id : XP_986727.1

name	Abp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22095013 GeneID:76507 MGI:1923757
definition	GO_function : GO:0008131 - amine oxidase activity [Evidence ISS]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0015898 - amiloride transport [Evidence ISS]; GO:0006118 - electron transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : amiloride binding protein 1 (amine oxidase, copper-containing) protein_id : NP_083914.1

name	1600015I10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486897 GeneID:69761 MGI:1917011
definition	codon_start : 1 product : hypothetical protein LOC69761 protein_id : NP_001074742.1

name	Doxl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71725389 CCDS:CCDS20120.1 GeneID:243376 MGI:3618290
definition	GO_function : GO:0005507 - copper ion binding [Evidence IEA] codon_start : 1 product : diamine oxidase-like protein 2 protein_id : NP_001025158.1

name	Svs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370356 CCDS:CCDS20121.1 GeneID:243377 MGI:2682321
definition	GO_function : GO:0005507 - copper ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : seminal vesicle secretion 1; SVS I product : seminal vesicle-secreted protein I protein_id : NP_766476.1

name	Gpnmb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542907 CCDS:CCDS20122.1 GeneID:93695 MGI:1934765
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008201 - heparin binding [Evidence IDA]; GO:0005178 - integrin binding [Evidence IDA] GO_process : GO:0007155 - cell adhesion [Evidence IDA] codon_start : 1 exception : mismatches in translation note : iris pigment dispersion; Osteoactivin product : glycoprotein (transmembrane) nmb protein_id : NP_444340.2

name	Igf2bp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542992 GeneID:140488 MGI:1890359
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006417 - regulation of protein biosynthesis [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006445 - regulation of translation [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : insulin-like growth factor 2, binding protein 3 protein_id : NP_076159.2

name	LOC100040626 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255129 GeneID:100040626
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475054.1

name	Tra2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111160869 GeneID:101214 MGI:1933972
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0042802 - identical protein binding [Evidence IPI]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence ISS] [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 note : nuclear transformer-2 alpha; Tra2alpha product : transformer-2 alpha protein_id : NP_932770.2

name	Ccdc126 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424699 CCDS:CCDS20125.1 GeneID:57895 MGI:1889376
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 product : coiled-coil domain containing 126 protein_id : NP_780307.1

name	D330028D13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370060 CCDS:CCDS20126.1 GeneID:231946 MGI:2442161
definition	codon_start : 1 product : hypothetical protein LOC231946 protein_id : NP_766315.1

name	Stk31 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31044416 GeneID:77485 MGI:1924735
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : serine threonine kinase 31 protein_id : NP_084192.1

name	Npy (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963683 GeneID:109648 MGI:97374
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0001664 - G-protein-coupled receptor binding [Evidence IDA] [Evidence IGI]; GO:0005179 - hormone activity [Evidence IEA] GO_process : GO:0008217 - blood pressure regulation [Evidence IDA]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA] codon_start : 1 product : neuropeptide Y protein_id : NP_075945.1

name	LOC100041653 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255153 GeneID:100041653
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477055.1

name	LOC624524 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82901024 GeneID:624524
definition	codon_start : 1 product : hypothetical protein protein_id : XP_903481.1

name	Mpp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910474 CCDS:CCDS20128.1 GeneID:56524 MGI:1927340
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004385 - guanylate kinase activity [Evidence ISS]; GO:0030165 - PDZ domain binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IEA]; GO:0008022 - protein C-terminus binding [Evidence IPI] codon_start : 1 exception : mismatches in translation product : membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 6) protein_id : NP_064323.1

name	Dfna5h (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055204 CCDS:CCDS20130.1 GeneID:54722 MGI:1889850
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0035315 - hair cell differentiation [Evidence IMP]; GO:0007605 - sensory perception of sound [Evidence ISS] codon_start : 1 note : nonsyndromic hearing impairment protein product : deafness, autosomal dominant 5 protein protein_id : NP_061239.1

name	LOC100041681 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255157 GeneID:100041681
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477125.1

name	Osbpl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21687076 GeneID:71720 MGI:1918970
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : oxysterol-binding protein-related protein 3 product : oxysterol-binding protein-like protein 3 protein_id : NP_082157.1

name	Cycs (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681095 CCDS:CCDS20131.1 GeneID:13063 MGI:88578
definition	GO_component : GO:0005829 - cytosol [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0005625 - soluble fraction [Evidence IDA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0008635 - caspase activation via cytochrome c [Evidence IMP]; GO:0043065 - positive regulation of apoptosis [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : cytochrome c, somatic protein_id : NP_031834.1

name	4921507P07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21389313 CCDS:CCDS20132.1 GeneID:70821 MGI:1918071
definition	codon_start : 1 product : hypothetical protein LOC70821 protein_id : NP_081840.1

name	LOC100040560 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040560
definition	number : 4 pseudo : _no_value

name	LOC100040560 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040560
definition	number : 3 pseudo : _no_value

name	LOC100040560 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040560
definition	number : 2 pseudo : _no_value

name	LOC100040560 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040560
definition	number : 1 pseudo : _no_value

name	LOC100040589 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040589
definition	number : 2 pseudo : _no_value

name	LOC100040589 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040589
definition	number : 1 pseudo : _no_value

name	LOC384383 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384383
definition	number : 1 pseudo : _no_value

name	LOC666210 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666210
definition	number : 1 pseudo : _no_value

name	LOC666210 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666210
definition	number : 2 pseudo : _no_value

name	LOC666210 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666210
definition	number : 3 pseudo : _no_value

name	LOC666210 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666210
definition	number : 4 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:165465
definition	standard_name : AI425994

name	(CDS detail)
type	STS
link
xref	UniSTS:235440
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:207949
definition	standard_name : BB283937

name	(CDS detail)
type	STS
link
xref	UniSTS:207950
definition	standard_name : AI182503

name	(CDS detail)
type	STS
link
xref	UniSTS:165463
definition	standard_name : AI854703

name	(CDS detail)
type	STS
link
xref	UniSTS:130867
definition	standard_name : D6Mit314

name	(CDS detail)
type	STS
link
xref	UniSTS:185665
definition	standard_name : BB145400

name	(CDS detail)
type	STS
link
xref	UniSTS:207951
definition	standard_name : BB276914

name	(CDS detail)
type	STS
link
xref	UniSTS:210423
definition	standard_name : RH136437

name	(CDS detail)
type	STS
link
xref	UniSTS:130976
definition	standard_name : D6Mit74

name	(CDS detail)
type	STS
link
xref	UniSTS:130821
definition	standard_name : D6Mit274

name	(CDS detail)
type	STS
link
xref	UniSTS:159502
definition	standard_name : AI449249

name	(CDS detail)
type	STS
link
xref	UniSTS:271715
definition	standard_name : PMC186618P3

name	(CDS detail)
type	STS
link
xref	UniSTS:185667
definition	standard_name : BB168546

name	(CDS detail)
type	STS
link
xref	UniSTS:271715
definition	standard_name : PMC186618P3

name	(CDS detail)
type	STS
link
xref	UniSTS:216450
definition	standard_name : RH133167

name	(CDS detail)
type	STS
link
xref	UniSTS:159500
definition	standard_name : AU040201

name	(CDS detail)
type	STS
link
xref	UniSTS:124755
definition	standard_name : D17978

name	(CDS detail)
type	STS
link
xref	UniSTS:235437
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:235435
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130866
definition	standard_name : D6Mit313

name	(CDS detail)
type	STS
link
xref	UniSTS:159503
definition	standard_name : AI429442

name	(CDS detail)
type	STS
link
xref	UniSTS:234646
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:235438
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130685
definition	standard_name : D6Mit142

name	(CDS detail)
type	STS
link
xref	UniSTS:159499
definition	standard_name : AU045931

name	(CDS detail)
type	STS
link
xref	UniSTS:162201
definition	standard_name : RH125379

name	(CDS detail)
type	STS
link
xref	UniSTS:163033
definition	standard_name : RH126325

name	(CDS detail)
type	STS
link
xref	UniSTS:224448
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:245060
definition	standard_name : AI713502

name	(CDS detail)
type	STS
link
xref	UniSTS:479159
definition	standard_name : Tra2a

name	(CDS detail)
type	STS
link
xref	UniSTS:162175
definition	standard_name : RH125353

name	(CDS detail)
type	STS
link
xref	UniSTS:207953
definition	standard_name : BE136002

name	(CDS detail)
type	STS
link
xref	UniSTS:161352
definition	standard_name : RH124530

name	(CDS detail)
type	STS
link
xref	UniSTS:235443
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:159505
definition	standard_name : AI465320

name	(CDS detail)
type	STS
link
xref	UniSTS:235442
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:224939
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:144064
definition	standard_name : Npy

name	(CDS detail)
type	STS
link
xref	UniSTS:109716
definition	standard_name : AU048256

name	(CDS detail)
type	STS
link
xref	UniSTS:216875
definition	standard_name : RH133592

name	(CDS detail)
type	STS
link
xref	UniSTS:123302
definition	standard_name : 16.MMHAP31FLF1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:143111
definition	standard_name : Fin15

name	(CDS detail)
type	STS
link
xref	UniSTS:163384
definition	standard_name : U42384

name	(CDS detail)
type	STS
link
xref	UniSTS:207954
definition	standard_name : BB219592

name	(CDS detail)
type	STS
link
xref	UniSTS:124448
definition	standard_name : 42.MHAa90d6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:179371
definition	standard_name : X01756

name	AI854703 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149255141 GeneID:243373 MGI:2141510
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 32 ESTs product : expressed sequence AI854703 transcript_id : XR_035307.1

name	LOC666011 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255149 GeneID:666011
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 7 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_032935.1

clone name	MSMg01-369D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378D03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-447C02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-106L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356B08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-460L23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-125E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352O02
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-315I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028L24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-420F02.T7 (MSMg01no420_f02.b1)	MSMg01-420F02.TJ (MSMg01no420_f02.g1)
ACC	AG515211	AG515212
length	797	720
length of high quality (start - end)	---	439 (73 - 511)
definition	CHROMAT_FILE: MSMg01no420_f02.b1 PHD_FILE: MSMg01no420_f02.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:40:07 2005	CHROMAT_FILE: MSMg01no420_f02.g1 PHD_FILE: MSMg01no420_f02.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:40:07 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NCTCAAAAAATTTCCGGCGCCAAAANGAAAACCAATTTCGAAGCGGNGGC GNGGGAAANNNCATNATAGCGNGAGGGGGAAAGAGCAANTCACACACNAC CCTAAGNGGCGTTGGNGATTTTTTATAAATTAANTTTTTCTTTATGTGGN TGAGAGTTATGTCTAAAATGTGTTGCTGTGTAAACTGTGGAGACAATGTT TTGTTTGTGTTTTGTTTANANATNANACACCCCTGAAAAAGGAATACAGA ATGNGNTAATTTTTTATGNGNATGTTGGAAATTAAATTTGGNCCCCCGCA AAACAACAAAGGCCCCCAATTTTTTATANTCTCCGGNAANNNAANAACAA AAANNNNAAANAATTTTATTTCAAAATGTTATTTCTTTTTTCAAATTTTT CCTTCAAAAAACCCCTAATTCAATCCTCCCCTCCCCTTTTTTTTAAAAAG GTTTTTTACCCCCCCCCCAAAAAACCCTAAATTTTTTTGCTGTGGAATTC CCAAAAAGGGGGGAAAAAAACTTTTTTAAAAAAAAAAAGCCCCTTTTTTT TATTTTTTTTTAAAAAAAAGCGAACCCCGGGGGAAAAAAAGTCCNCTCGG AAAACGGGAAAACCCTTTTTGGAGAAAATTCCTCCGGGGGGGGGTAAAAA ATTCCCGGANAAAAAGGCGGGCTTTTTTTTTTTTTCAAAAAAAAAGTTCC ACTTTTATAATTGGGTGCGACAATACCCCCAAATAAAATTTTCTTTTCAT TTCCCAATTCTAGGTCGTTACATATTTTGTGGGGTATTTATATATTT	ATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXCCAGTCTCTGAGAAACATAGTTCAGATA TTCCATCCTTCTACACGGAGTCACTATGTAGTCGAGGCAGGCTGCATATG ACTTATGAACCTAAGAGGGAGTGGTGGGAAACATGAGAGTTAACAGTCAT GTCAGAGGTACACTGCCTTGAGGCAGTGTCTCATGTAGCCTAGGCTGGCC CAAACTTTATTCATTGTGTAGCTAAGGATGACCTTGAATTCTTGGTTGTC TTGCCTCCACTTCTCAAGTGCTGATATAGGCATACACCACCACCATGCCT AGCCCAAAGTTCAGAAACAAAACTCATGATAAAGCATTGCTTTTGTATCA AAAGCAACATAGGGTCTGTGTAAAAAGAAAAAAAAACCAAAACCAAACAA ACAAAAACAGCAGCAGCAACAACACATATGCATGCATGCATGCACTCATG CACACACACACACTCACACACACACACACTGCTCTAAACATAGGGCTGTG GACAGAGCTGAGTGATACAGCACTATGTGCTCAAGGCCCTGGTTCTATTC TCAGTGCCTGGGCAAGAAGCACATTGTTTGCCCTCTCCGTCTGTGAGAGT TACGTCCTTGTATATTCATAAATTTTACCGCCCGGTTCTTTTATACATTT TGAACCGCCCGCTCTGGTAN
quality values	Open. Hide. 0 3 9 9 11 11 12 12 15 9 7 7 7 7 7 6 6 8 8 6 7 7 7 7 3 0 3 7 7 9 7 7 3 3 6 6 7 6 6 3 3 6 6 6 6 3 0 3 9 9 3 0 3 8 8 8 18 3 0 0 0 3 9 3 0 3 3 3 3 3 3 0 3 9 11 9 7 7 7 7 9 9 6 6 6 6 10 3 0 3 19 13 10 8 17 6 3 0 3 9 11 25 11 17 11 3 0 3 9 9 9 9 9 9 3 0 3 6 6 7 6 6 7 6 9 9 11 11 21 20 18 17 3 0 3 15 17 14 8 9 11 15 15 15 10 9 21 15 3 0 3 15 6 6 6 15 8 6 6 8 19 15 16 18 19 19 17 14 9 9 9 9 9 18 11 10 9 10 10 14 14 15 10 8 8 9 12 6 6 6 6 6 6 11 8 8 6 8 11 12 9 7 7 7 9 7 7 9 9 9 6 6 6 6 6 7 8 3 0 3 0 3 3 0 3 0 3 8 6 7 7 9 9 16 32 30 23 20 24 19 13 10 11 8 7 6 6 6 6 6 11 8 3 0 3 0 3 9 10 10 14 16 21 12 9 10 10 3 0 3 0 3 8 8 11 11 8 11 11 10 6 6 6 6 7 6 8 9 8 8 3 0 3 8 8 8 8 8 7 7 8 15 7 9 9 9 8 8 9 8 8 8 8 8 15 15 8 11 10 9 6 9 7 7 6 6 6 3 0 3 7 7 7 9 9 3 0 3 3 0 0 0 3 3 0 3 6 6 6 10 17 17 3 0 0 0 0 3 9 3 0 3 7 6 7 7 6 6 6 7 8 8 8 9 10 9 10 8 8 8 8 8 7 9 9 8 10 10 8 8 8 8 7 8 11 10 16 18 15 9 9 9 10 8 8 8 10 12 12 14 12 12 11 16 9 9 9 9 9 9 12 9 9 10 10 10 11 13 11 11 11 11 15 18 10 8 6 7 7 9 9 6 8 8 10 12 10 9 8 8 8 8 13 11 11 9 6 6 6 6 6 8 10 12 21 21 9 9 10 16 21 25 27 25 16 16 9 9 10 12 12 14 12 10 7 9 9 10 10 10 8 6 6 6 6 15 13 20 19 14 13 12 9 8 8 7 7 8 8 8 8 7 7 12 10 14 13 18 19 12 10 10 19 23 22 13 11 11 22 17 10 9 9 9 16 12 11 8 8 8 8 8 8 11 17 17 20 10 9 8 8 8 8 8 8 8 22 17 15 15 9 12 9 9 17 13 26 11 8 6 6 6 7 6 10 8 15 6 6 6 7 9 9 9 17 22 29 17 12 8 8 6 6 3 0 3 6 10 11 15 15 15 8 17 11 6 6 6 6 6 6 12 12 21 12 9 9 11 8 8 6 6 6 6 8 13 22 21 16 8 8 11 8 8 6 8 10 11 13 12 15 8 8 8 8 8 8 13 15 30 19 13 9 7 8 8 8 8 3 0 3 14 12 13 9 6 8 6 8 8 8 9 9 17 16 13 19 24 24 17 17 21 19 19 11 15 14 23 15 15 19 16 14 12 13 10 11 11 10 10 10 8 8 8 8 9 8 8 8 8 8 9 8 8 8 8 8 8 10 9 9 6 6 6 6 8 19 19 10 10 6 6 6 6 15 19 13 6 6 6 6 8 8 8 13 17 10 12 8 7 9 7 8 15 7 6 8 8 6 7 9 8 8 6 6 8 8 8 8 9 9 8 8 6 6 11 10 8 8 9 8 8 8 8 8 8 9 13 9 9 8 8 8 8 6 6 6	Open. Hide. 12 15 10 10 9 9 15 10 9 9 18 19 37 32 31 29 35 39 39 41 42 59 59 59 59 27 30 20 20 19 14 12 10 10 10 13 10 13 13 21 21 37 37 53 53 50 36 36 33 33 33 50 42 25 27 11 8 6 6 6 10 15 26 28 39 39 28 30 31 23 26 18 18 11 24 26 53 59 59 59 57 57 57 57 50 50 50 57 68 68 68 68 47 47 42 41 41 42 50 54 68 51 50 50 50 50 50 59 59 54 57 48 48 46 42 40 40 48 48 48 48 57 57 57 57 59 68 59 59 57 57 46 46 46 54 59 59 59 59 59 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 57 57 54 54 57 59 57 57 57 52 57 52 54 54 57 57 57 57 57 57 52 52 52 57 57 57 57 57 57 57 57 57 57 57 68 68 68 57 57 57 52 52 52 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 57 57 68 68 68 68 59 59 52 52 57 59 57 52 52 62 44 62 62 45 45 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 62 62 62 62 52 43 43 38 41 43 43 62 62 68 68 68 62 62 62 62 62 62 62 62 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 57 57 57 59 59 57 57 57 57 57 57 57 57 57 57 57 52 57 57 57 59 57 57 52 52 52 57 57 57 52 52 52 57 57 59 52 57 57 59 59 59 57 59 68 59 59 59 57 52 52 59 59 57 54 52 52 52 52 52 43 43 38 43 43 57 57 57 57 57 57 57 52 52 52 52 43 43 42 42 35 43 42 50 42 37 42 33 33 29 27 28 28 23 23 27 28 31 42 36 32 29 18 18 22 27 24 17 17 17 22 24 30 42 42 32 32 13 13 13 13 13 15 25 13 13 13 34 32 44 36 25 25 36 36 39 28 27 19 19 15 29 17 20 15 34 13 17 17 30 29 43 43 39 28 28 25 25 25 33 23 16 12 15 10 10 12 23 12 11 11 11 11 11 11 17 10 28 28 30 28 37 24 28 23 22 22 33 36 43 37 29 18 10 10 10 9 10 10 15 15 17 17 17 22 19 19 14 21 22 10 10 10 12 12 15 16 11 8 8 8 8 8 8 11 18 20 13 11 11 12 13 15 11 11 11 14 15 18 13 11 8 8 10 10 8 8 11 16 12 12 9 9 9 9 12 16 12 11 11 10 10 10 10 10 10 11 12 10 8 8 8 8 9 8 12 15 15 15 21 10 9 9 10 10 10 10 15 10 9 8 8 8 10 10 10 10 8 11 8 8 8 10 8 8 8 8 8 8 13 10 11 10 9 10 10 10 10 10 9 11 11 9 11 9 9 9 11 12 12 12 18 8 8 8 8 8 8 9 9 9 8 8 8 10 10 9 9 7 7 11 11 11 9 9 13 13 12 10 8 8 8 8 8 8 9 10 12 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no420_f02.g1 MSMg01no420_f02.g1 CHROMAT_FILE:
MSMg01no420_f02.g1 PHD_FILE: MSMg01no420_f02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:07 2005
         (439 letters)



>mm_chr6_49541838_49542682
          Length = 845

 Score =  816 bits (422), Expect = 0.0
 Identities = 436/444 (98%), Gaps = 6/444 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   cagtctctgagaaacatagttcagatattccatccttctacacggagtcactatgtagtc 61
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 202 cagtctctgagaaacatagttcagatattccatccttctacatggagtcactatgtagtc 261

                                                                       
Query: 62  gaggcaggctgcatatgacttatgaacctaagagggagtggtgggaaacatgagagttaa 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gaggcaggctgcatatgacttatgaacctaagagggagtggtgggaaacatgagagttaa 321

                                                                       
Query: 122 cagtcatgtcagaggtacactgccttgaggcagtgtctcatgtagcctaggctggcccaa 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cagtcatgtcagaggtacactgccttgaggcagtgtctcatgtagcctaggctggcccaa 381

                                                                       
Query: 182 actttattcattgtgtagctaaggatgaccttgaattcttggttgtcttgcctccacttc 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 actttattcattgtgtagctaaggatgaccttgaattcttggttgtcttgcctccacttc 441

                                                                       
Query: 242 tcaagtgctgatataggcatacaccaccaccatgcctagcccaaagttcagaaacaaaac 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tcaagtgctgatataggcatacaccaccaccatgcctagcccaaagttcagaaacaaaac 501

                                                                       
Query: 302 tcatgataaagcattgcttttgtatcaaaagcaacatagggtctgtgtaaaaagaaaaaa 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 502 tcatgataaagcattgcttttgtatcaaaagcaacatagggtctgtgtaaaaaaaaaaaa 561

                                                                       
Query: 362 a------aaccaaaaccaaacaaacaaaaacagcagcagcaacaacacatatgcatgcat 415
           |      |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 acaacaaaaccaaaaccaaacaaacaaaaacagcagcagcaacaacacatatgcatgcat 621

                                   
Query: 416 gcatgcactcatgcacacacacac 439
           ||||||||||||||||||||||||
Sbjct: 622 gcatgcactcatgcacacacacac 645


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 845
Length adjustment: 9
Effective length of query: 430
Effective length of database: 836
Effective search space:   359480
Effective search space used:   359480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information