Query= MSMg01no420_o15.b1 MSMg01no420_o15.b1 CHROMAT_FILE:
MSMg01no420_o15.b1 PHD_FILE: MSMg01no420_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:54 2005
(128 letters)
>mm_chr6_96434541_96435066
Length = 526
Score = 232 bits (120), Expect = 5e-66
Identities = 124/126 (98%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 1 agctattgctaaccctgatgagccttacacaggaagtcagcagtgcagcacctcagatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agctattgctaaccctgatgagccttacacaggaagtcagcagtgcagcacctcagatgt 260
Query: 61 gcacttaggccaaacacactccaaaggagagtcagctctctggtaggacccacatatttg 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcacttaggccaaacac--tccaaaggagagtcagctctctggtaggacccacatatttg 318
Query: 121 ctggtt 126
||||||
Sbjct: 319 ctggtt 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 128
Length of database: 526
Length adjustment: 8
Effective length of query: 120
Effective length of database: 518
Effective search space: 62160
Effective search space used: 62160
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no420_o15.g1 MSMg01no420_o15.g1 CHROMAT_FILE:
MSMg01no420_o15.g1 PHD_FILE: MSMg01no420_o15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:54 2005
(601 letters)
>mm_chr6_96673922_96674922
Length = 1001
Score = 1120 bits (579), Expect = 0.0
Identities = 596/603 (98%), Gaps = 4/603 (0%)
Strand = Plus / Minus
Query: 1 cagataggttctgggttgtccctgtgctcatggattaggaaagaagaccttgtgtgtata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cagataggttctgggttgtccctgtgctcatggattaggaaagaagaccttgtgtgtata 742
Query: 61 atgaacaaaacaaaatatggtcaaaacaaagcaagggctcaaagcctgcccttgcttgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgaacaaaacaaaatatggtcaaaacaaagcaagggctcaaagcctgcccttgcttgca 682
Query: 121 ctcctccctgacctccagaggactagtgcatttccagcctcatggataactaggatggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctcctccctgacctccagaggactagtgcatttccagcctcatggataactaggatggac 622
Query: 181 tcatcgcttgtgttcagttggtgctttgcaaattccatacttattttgagttagctttac 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatcgattgtgttcagttggtgctttgcaaattccatacttattttgagttagctttac 562
Query: 241 atgtttctgtgtattatccctctgtgtatttgttttttgtggctgctgtaacactttgct 300
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 atgtttctgtgcattatccctctgtgtatttgttttctgtggctgctgtaacactttgct 502
Query: 301 aataatttgatcatttgaaaactggacattcttttattattttagaaaccagaaacctga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aataatttgatcatttgaaaactggacattcttttattattttagaaaccagaaacctga 442
Query: 361 aatcctgatgtcagcagactggatgacctccaaagtctttaaagagcagttccttccttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatcctgatgtcagcagactggatgacctccaaagtctttaaagagcagttccttccttc 382
Query: 421 agtggccccacggtttctttcacttgcgctcatctaactccaacatctatcttcatagac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtggccccacggtttctttcacttgcgctcatctaactccaacatctatcttcatagac 322
Query: 481 acacagcattctctgtgccatctatttagttgggttactagatttggagtcctgctggac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacagcattctctgtgccatctatttagttgggttactagatttggagtcctgctggac 262
Query: 541 acaaatataatcctattttgaagttctacatgtgca--ggctataaaaaatactatagtc 598
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 261 acaaatataatcctattttgaagttctacatgt--aatggctataaaaaatactatagtc 204
Query: 599 tgg 601
|||
Sbjct: 203 tgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space: 585681
Effective search space used: 585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
