Query= MSMg01no421_l12.b1 MSMg01no421_l12.b1 CHROMAT_FILE:
MSMg01no421_l12.b1 PHD_FILE: MSMg01no421_l12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:00 2005
(534 letters)
>mm_chr6_83896287_83897220
Length = 934
Score = 1009 bits (522), Expect = 0.0
Identities = 530/534 (99%), Gaps = 3/534 (0%)
Strand = Plus / Minus
Query: 1 cctctctcttatattgtgatgtcttttcttttttggtttgtggcctactgtatttattta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 cctctctcttatattgtgatgtcttttcttttttggtttgtggcctactgtatttattta 692
Query: 61 aaattgcatgcatgagcatatgtggcacataagcctgatatacatgtgtaatttgtattt 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 691 aaattgcatgcatgagcataggtggcacataagcctgatatacatgtgtaatttgtattt 632
Query: 121 tttgagcttaggaccaaacccagagcctagcaagcactctatcatgagctaaatcccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tttgagcttaggaccaaacccagagcctagcaagcactctatcatgagctaaatcccaac 572
Query: 181 tacaaaatgtttaaagcctctccctttacggaaactaccatgtcttccctttgcctcaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tacaaaatgtttaaagcctctccctttacggaaactaccatgtcttccctttgcctcaac 512
Query: 241 tcaacaatagtctattatccttagtctagggttggtccataattcacaaactttatcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tcaacaatagtctattatccttagtctagggttggtccataattcacaaactttatcatg 452
Query: 301 aatataacatacatgtaaacaatataaacggtacaagagaaatcatttcttttcaaactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aatataacatacatgtaaacaatataaacggtacaagagaaatcatttcttttcaaactt 392
Query: 361 tcacttttatttttagtattcttagaaacacagcaatgttttctcatttacatatccaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tcacttttatttttagtattcttagaaacacagcaatgttttctcatttacatatccaca 332
Query: 421 cctatttctatatgacaatggcaaaataactgtgcccctatgaccagcctatgaaacctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cctatttctatatgacaatggcaaaataactgtgcccctatgaccagcctatgaaacctt 272
Query: 481 aaatatttattatctggcactttattctataaatatgtcaattctctggagcct 534
|||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 271 aaatatttattatctggcactttattctat---tatgtcaattctctggagcct 221
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_l12.g1 MSMg01no421_l12.g1 CHROMAT_FILE:
MSMg01no421_l12.g1 PHD_FILE: MSMg01no421_l12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:00 2005
(249 letters)
>mm_chr6_83702218_83702866
Length = 649
Score = 431 bits (223), Expect = e-125
Identities = 238/249 (95%), Gaps = 10/249 (4%)
Strand = Plus / Plus
Query: 1 acaggggacatcctgcggactcctgtgtcagaggacatgctgggtgagagtggggaagat 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 211 acaggggacatcctgcggactcctgtgtcagaagacatgctgggtgagagtggggaagat 270
Query: 61 attctctctctctctctctctctctctctctctctctctctctctctctctctctctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 attctctctctctctctctctctctctctctctctctctctctctctctctctctc---- 326
Query: 121 tctctcatccctagtgcagggcccagcacatagaccatgctctacaatgaaatggtgagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ------atccctagtgcagggcccagcacatagaccatgctctacaatgaaatggtgagg 380
Query: 181 ctaagtcattacaggtgcaggttgaaagggatggctaagcacttccttacttcagcctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaagtcattacaggtgcaggttgaaagggatggctaagcacttccttacttcagcctga 440
Query: 241 ttctctgat 249
|||||||||
Sbjct: 441 ttctctgat 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 94
Number of extensions: 32
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 23
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
