Query= MSMg01no422_e17.b1 MSMg01no422_e17.b1 CHROMAT_FILE:
MSMg01no422_e17.b1 PHD_FILE: MSMg01no422_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:42 2005
(499 letters)
>mm_chr6_60811726_60812624
Length = 899
Score = 949 bits (491), Expect = 0.0
Identities = 497/499 (99%)
Strand = Plus / Plus
Query: 1 ggactggttggctaatgagctgcaaaaatgttctgtctgtactcttaactcttatactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggactggttggctaatgagctgcaaaaatgttctgtctgtactcttaactcttatactgg 260
Query: 61 agttacagatacccagagttgtatacagaggttttacatggttgacagggaccagactga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttacagatacccagagttgtatacagaggttttacatggttgacagggaccagactga 320
Query: 121 ggtcctcattctggtggaacaggcaccacactgagtcaccttcgctggccctgaaataac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtcctcattctggtggaacaggcaccacactgagtcaccttcgctggccctgaaataac 380
Query: 181 agttctttattgtttgtgaccatgtacttcaacttttaaaatcttgaacgtttgaaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 agttctttattgtttgtgaccatgtacttcaacttttaaaatcttgaacatttgaaaaga 440
Query: 241 taaaatctttacaatttaaaattttgaaacattgcaatgatttctacataatttagctct 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 taaaatctttacaatttaaaattttgaaacattgcaatgatttctatataatttagctct 500
Query: 301 cagtgtctgaaaggggctttaaaaatctcaaaatggcaagagggggctttgatatgcgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagtgtctgaaaggggctttaaaaatctcaaaatggcaagagggggctttgatatgcgtt 560
Query: 361 aacatcctgtgtttccttgaaattcgagaaatccccacaaaatgtcaggtattttctagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacatcctgtgtttccttgaaattcgagaaatccccacaaaatgtcaggtattttctagg 620
Query: 421 tagagaacttgttaagtttagaggacttaagttagaaggtttctaatctagatggaatgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tagagaacttgttaagtttagaggacttaagttagaaggtttctaatctagatggaatgg 680
Query: 481 tagattctgagtaatcatt 499
|||||||||||||||||||
Sbjct: 681 tagattctgagtaatcatt 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_e17.g1 MSMg01no422_e17.g1 CHROMAT_FILE:
MSMg01no422_e17.g1 PHD_FILE: MSMg01no422_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:43 2005
(468 letters)
>mm_chr6_60970554_60971420
Length = 867
Score = 797 bits (412), Expect = 0.0
Identities = 455/478 (95%), Gaps = 16/478 (3%)
Strand = Plus / Minus
Query: 1 tttgcttattttctttcatctagtaacccccaccccacacacacacacacacctacccca 60
||||| |||||||||||||||||||||||||||||| | | |||||||||||||||||||
Sbjct: 811 tttgcctattttctttcatctagtaacccccaccccccccccacacacacacctacccca 752
Query: 61 cttt-----aaaaaaaaaaaaaactagaaagctcagggtcttactctgaagccttggctg 115
||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 751 ttttaaaaaaaaaaaaaaaaaaaccagaaagctcagggtcttactctgaagccttggctg 692
Query: 116 gccttgagctcattgaaatctgccagagatgaaaggtgtttgctaccacaccctgcttta 175
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gccttgagctcattgaaaactgccagagatgaaaggtgtttgctaccacaccctgcttta 632
Query: 176 aatccctccctttcatctttgatttaggtttctattcctgcagagctacagcctagtaca 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 aatccctccctttcatctttgatttaggtttctattcctgcagagctacagcctagtaca 572
Query: 236 aagtacagtgttttttt-----tttctgggaaagtcttctgaaagtagtctacttggttt 290
|||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aagtacagtg------tcagggtttctgggaaagtcttctgaaagtagtctacttggttt 518
Query: 291 taatcatagtgcctgacaggcagaatgtgactggtcacggtttgggaaaaaacagactaa 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 taatcatagtgcctgacaggcagaatgtgactggtcacggtttgggaaaaaacagactaa 458
Query: 351 ctgacatatggctacatcagagtaacccggacaacctagatgaccagagtcatggagcag 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ctgacatatggctacatcagagtaacccggacaacctagatgaccagagtcatggagcag 398
Query: 411 aagagtaaagtcatagtgaacagaaggcaaagcccgagacatcgttcagcgatggtaa 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aagagtaaagtcatagtgaacagaaggcaaagcccgagacatcgttcagcgatggtaa 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 867
Length adjustment: 10
Effective length of query: 458
Effective length of database: 857
Effective search space: 392506
Effective search space used: 392506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
