XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGGAATT
CCGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCTAGCCTGA
CCAATTGGGTTTTAAATGTAAAAGCTTTTCTGTTTCACGGGCCAGTGAGA
CAGCTCAGTTGACCTCACTTCAGTCTTCAGAACCCAGAGTGGACAAAGAA
ACCTGATTCCCAAAAGTTGTCCTCTGGTCTCCATATGTGCACCATGGTGT
ACTCCACATATATGCTTAATAATAATAATAATAATAATAATAATAATAAT
AATAATATTTANTATGATTGTGTTTCAAAGGACACCATCAAGAAAATAAA
AGGGCAGGCTGATATCCATGGGAGGACTCCCCTTTTCTGAGGAGAAAGGG
AGCACTGACTGGAGGATGAGGGGTGGGAGATGGGAGAAANNNTNTGNTNT
NNTTTTTTTNNTTTTTTTTTTTTTTNTTTTTTTTTNTTTTTTTTTTTTTT
TTNTTTCCTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTCTCCTTTTTTT
TNNTTTTTTTTCTTTTTTTTCTTTTNTCTCTTTTTTTTCCCTTTTTTTTT
CCTCTCTTCTTTTTCTTCCTANTTTTCTTTCTTTTTTTTTTCTCCCNNCC
CCTTTTCCTTTCCTACCTTCCCCCTTCCTCCCCCCTTTTTTCCCCCTCCC
CCTTTTATTTTCTTCCTTTCTTCTTTTTTTTTTCCTTTT

GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXCAACTAATTCCTTATTGAAGAGCTGCTATTCCATGCTT
AATTCCTACCAGCCAAGAAGAATGTGTTGGTGAAACAGAAGTGACAAACA
GGTACTGCTGCACCCTGGAAATGGAAATAGCCAGAGAAGGCAGCTCTGCA
CTCAGAGCCAGCCTGGACGGGAATAAGAAAGCATGCGCGCGCATGCGCAG
AACCTCTGCCTGGCCAAGAACTAAGAAGGAAAGCCTTAGAGGGGTAAAAA
GTCTGCTTAAATACACTTCTGTACAATTCATAATGTCGGTAATGAAAAGG
AGATTGTTAAAAACAAAAATCGGTGTGGTTACTTGTTCAAGAAACAGTCC
AATCAGCTCCTGTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT
TCTTTCTTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC
CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT
TCCTTCTTTCTTTCTTTCTTTCCTTCTTTCTTCCTTTCTTTCTCTTTTGT
TTGCTTCCCGAAACCCCCCTTCTCCATGTATCCCTGCCTTGCCCCGTTTA
CTCACCCTGTAAAACACCCCGTGCTTTTTACCTCCAAATTACTCTTGCCC
TCCGCTTTCCTAATTGGTTGCGATCAATAGTGCTTGTTTATTCCCCCCCC
CCTCTG

Query= MSMg01no423_f14.g1 MSMg01no423_f14.g1 CHROMAT_FILE:
MSMg01no423_f14.g1 PHD_FILE: MSMg01no423_f14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:00 2005
         (503 letters)



>mm_chr6_31184096_31184999
          Length = 904

 Score =  818 bits (423), Expect = 0.0
 Identities = 441/447 (98%), Gaps = 1/447 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caactaattccttattgaagagctgctattccatgcttaattcctaccagccaagaagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caactaattccttattgaagagctgctattccatgcttaattcctaccagccaagaagaa 260

                                                                       
Query: 61  tgtgttggtgaaacagaagtgacaaacaggtactgctgcaccctggaaatggaaatagcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgttggtgaaacagaagtgacaaacaggtactgctgcaccctggaaatggaaatagcc 320

                                                                       
Query: 121 agagaaggcagctctgcactcagagccagcctggacgggaataagaaagcatgcgcgcgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagaaggcagctctgcactcagagccagcctggacgggaataagaaagcatgcgcgcgc 380

                                                                       
Query: 181 atgcgcagaacctctgcctggccaagaactaagaaggaaagccttagaggggtaaaaa-g 239
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 atgcgcagaacctctgcctggccaagaactaagaaggaaagccttagaggggtaaaaaag 440

                                                                       
Query: 240 tctgcttaaatacacttctgtacaattcataatgtcggtaatgaaaaggagattgttaaa 299
           |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgcagaaatacacttctgtacaattcataatgtcggtaatgaaaaggagattgttaaa 500

                                                                       
Query: 300 aacaaaaatcggtgtggttacttgttcaagaaacagtccaatcagctcctgtttctttct 359
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 501 aacaaaaatcggtgtggttacttgttcaagaaacagtccaatcagctcctgtttgtttgt 560

                                                                       
Query: 360 ttctttctttctttctttctttctttctttctttctttctttctttccttccttccttcc 419
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgtttctttctttctttctttctttctttctttctttctttctttccttccttccttcc 620

                                      
Query: 420 ttccttccttccttccttccttccttc 446
           |||||||||||||||||||||||||||
Sbjct: 621 ttccttccttccttccttccttccttc 647


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 105
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 904
Length adjustment: 10
Effective length of query: 493
Effective length of database: 894
Effective search space:   440742
Effective search space used:   440742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)