Query= MSMg01no424_c05.b1 MSMg01no424_c05.b1 CHROMAT_FILE:
MSMg01no424_c05.b1 PHD_FILE: MSMg01no424_c05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:00 2005
(365 letters)
>mm_chr6_28711460_28712224
Length = 765
Score = 685 bits (354), Expect = 0.0
Identities = 361/364 (99%), Gaps = 2/364 (0%)
Strand = Plus / Minus
Query: 1 gttctcatggcaactggtagtcccaagatgcacatagcagtattggcaattactaattgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gttctcatggcaactggtagtcccaagatgcacatagcagtattggcaattactaattgg 331
Query: 61 gctgttgctaaaggtgaaaccttaatccttaagatactgcatgcgtgaagtgggtgaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gctgttgctaaaggtgaaaccttaatccttaagatactgcatgcgtgaagtgggtgaaat 271
Query: 121 agcatcctaacagaattttaaacctttcttatgttttaaaatataaagccttaaagataa 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 270 agcatcctaacagaattttaaacctttcttatgttttaaaatctaaagccttaaagataa 211
Query: 181 atccaaactcagctgggtggttgtggcacatgttattaatcccaggactcaggaggcaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 atccaaactcagctgggtggttgtggcacatgttattaatcccaggactcaggaggcaga 151
Query: 241 ggctctgagtttgaggccagcctagttgaaagggacagagacacacagacacacacagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ggctctgagtttgaggccagcctagttgaaagggacagagacacacagacacacacagac 91
Query: 301 atgtatacacacacagt--gagagagagaatggggagagagatggaaggagggagggaga 358
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atgtatacacacacagtgagagagagagaatggggagagagatggaaggagggagggaga 31
Query: 359 gtga 362
||||
Sbjct: 30 gtga 27
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space: 269136
Effective search space used: 269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_c05.g1 MSMg01no424_c05.g1 CHROMAT_FILE:
MSMg01no424_c05.g1 PHD_FILE: MSMg01no424_c05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:00 2005
(417 letters)
>mm_chr6_28562466_28563282
Length = 817
Score = 770 bits (398), Expect = 0.0
Identities = 409/414 (98%), Gaps = 3/414 (0%)
Strand = Plus / Plus
Query: 1 aaagatttcctgggaaacaatagtggaaacaattgtttttgttatttgtttttttttttg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 204 aaagatttcctgggaaacaatagtggaaacaattgtttttgttatttgtttttttt---g 260
Query: 61 tttgtttgtttaatatagaatctcactatagctctgctggcttggaactcccagaagtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtttgtttaatatagaatctcactatagctctgctggcttggaactcccagaagtct 320
Query: 121 accttttctctctgtgtcccaaatactgggacaaaatgtgttcattttgcagaacatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accttttctctctgtgtcccaaatactgggacaaaatgtgttcattttgcagaacatttg 380
Query: 181 acattttaattgataagttgatttaaccaattttagctgagatgacagtcacgctcagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acattttaattgataagttgatttaaccaattttagctgagatgacagtcacgctcagct 440
Query: 241 aaataattcacattaaatgagactagatgatgcctttgtggggcttattcaaaaagcaga 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaataaatcacattaaatgagactagatgatgcctttgtggggcttattcaaaaagcaga 500
Query: 301 ccatttgaagatagttttggagtccagaactgggccagcttgttcacttatgttcataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccatttgaagatagttttggagtccagaactgggccagcttgttcacttatgttcataaa 560
Query: 361 ttgtaactgagtaatctcttagcactaaaccaaatatcaccattcatatctgaa 414
||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 ttgtaactgagtaatctcttagcactaaaccaaatatcagcattcatatctgaa 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
