TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAAGGTTATTTACAGGAAAGATAAAGGAGCACAATGTATCTGTTCCTT
TGGCCATAAAATACAAGCAAAGATGTCACGCTGGGCTTTGATCCCGCGAC
AATGCTGTTTAGCAAAAGCAGCTGGTTTCAGTGTTTTCTGTTATGAAGCG
TGGAGGCATTACGAGGTCACAGGTGTGCGAAGAGCTCTAGAGATTATGTT
CAAGCTTGGGGTGGAAAGGGTCAGGGATATTTTCCACAAGTGCACAGCAT
TTGGGCTAAGCCGAAAGTATGGTGCTGTGGGTTTAACTGCACCTCCTAAC
ATTTGCATACTGAAATGATAACCCCTTGGTACTCAGGACATCATTTAGGA
AGGTCAGCTGATGGGACTGACAATCACCATGGAAACCCTCCTCTGGGCAG
TCTGTGATGGATTTTCTAGATTGGGTTAATTGAGAAGGGAAGACCCACGC
TACGTGTGAGCCACAGTCTTCCACGGGAGGACTGCTGTCTGGGACTGAAC
AAAAAGGAGAAAGCTGATCAAACAGCATCCATCACCCTCTGCTTCTTGAC
TCTATACATAGGTGCCTCCTGCTCCTGGCCCACGCCCCCTGCTCCCCCGC
GGCCATGCCTTCCCAGCTTGTGAATGCATCTTACATCCCAAGGAGCCTTT
TTCTCTTCCTTTCTCTATTCCTCCCTCCCTTCTTTGCCCTATTGGC

TTCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXTTCAAAAATGGAGGTGA
ACTATAGAAGTTTCGCGAAATTCCTGATCTTTCCAAAACTTTTATCATGA
ATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGATC
ATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATGGA
TTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTGGT
CAGGATGGATGATTTCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAATT
TTATTAAGGATTTTTGTATCTATATTCATAATAGAAATTGGTCTGAAGTT
CTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCATAGTAATAGTGG
CTTCATAATATGAGTTGGGTAGAGTACCTTCTACTTCTATCTTGTGAAAT
AGTTTGTGCAGAACTGGAATTACATCTTCTTTGAAGGTTTGATATAATTC
TGCACTAACCCTATCTGGTCCTTCTCTTTTTTTGTTTGTCAGACTATTAA
TAACTGCTTCTATTTTTTTACGCCATATGCTTATTGCTTATAACGTTTTC
CCGTATTTCTACTCTCTTTTGGTATTTGCCAATCTTTTTTCAACCCTCGT
TTCATTTCTTTTCCGCCTTTCTCCATCCTTTGTCTCCCTACAACCCTCCT
CTCCTTTTTCCCTTCTCGCCTTCCTTCAGTCCATCTCTTTCCCTCTTTCT
CTTTCATTCTCTTT

Query= MSMg01no424_e03.b1 MSMg01no424_e03.b1 CHROMAT_FILE:
MSMg01no424_e03.b1 PHD_FILE: MSMg01no424_e03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:10 2005
         (583 letters)



>mm_chr6_33943239_33944221
          Length = 983

 Score = 1067 bits (552), Expect = 0.0
 Identities = 573/580 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaaggttatttacaggaaagataaaggagcacaatgtatctgttcctttggcca 63
           |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaaggttacttagaggaaagataaaggagcacaatgtatctgttcctttggcca 263

                                                                       
Query: 64  taaaatacaagcaaagatgtcacgctgggctttgatcccgcgacaatgctgtttagcaaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taaaatacaagcaaagatgtcacgctgggctttgatcccgcgacaatgctgtttagcaaa 323

                                                                       
Query: 124 agcagctggtttcagtgttttctgttatgaagcgtggaggcattacgaggtcacaggtgt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agcagctggtttcagtgttttctgttatgaagcgtggaggcattacgaggtcacaggtgt 383

                                                                       
Query: 184 gcgaagagctctagagattatgttcaagcttggggtggaaagggtcagggatattttcca 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcgaagagctctagagattatgttcaagcttggggtggaaagggtcagggatattttcca 443

                                                                       
Query: 244 caagtgcacagcatttgggctaagccgaaagtatggtgctgtgggtttaactgcacctcc 303
           ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 444 caagtgcacagcatttgggctaagccgaaagcacggtgctgtgggtttaactgcacctcc 503

                                                                       
Query: 304 taacatttgcatactgaaatgataaccccttggtactcaggacatcatttaggaaggtca 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taacatttgcatactgaaatgataaccccttggtactcaggacatcatttaggaaggtca 563

                                                                       
Query: 364 gctgatgggactgacaatcaccatggaaaccctcctctgggcagtctgtgatggattttc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gctgatgggactgacaatcaccatggaaaccctcctctgggcagtctgtgatggattttc 623

                                                                       
Query: 424 tagattgggttaattgagaagggaagacccacgctacgtgtgagccacagtcttccacgg 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tagattgggttaattgagaagggaagacccacgctacgtgtgagccacagtcttccacgg 683

                                                                       
Query: 484 gaggactgctgtctgggactgaacaaaaaggagaaagctgatcaaacagcatccatcacc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gaggactgctgtctgggactgaacaaaaaggagaaagctgatcaaacagcatccatcacc 743

                                                   
Query: 544 ctctgcttcttgactctatacataggtgcctcctgctcct 583
           ||||||||||||||| |||||| || ||||||||||||||
Sbjct: 744 ctctgcttcttgactgtatacacagatgcctcctgctcct 783


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space:   557529
Effective search space used:   557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)