XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATTTT
CCTACCCAGTTTTGAATAGGGTTTTCATAACCTCTGACAGTAGTAAACCC
AACAGCATTTACAGAGAATTCAGACATATGCAAGTTTTTGAACTGACAAG
AAACCTTTTCCTCAACCATTGAAGCATTAACTAAGACATTTTTCTCACAC
TCACTATAATGATGGCAGTGGGGTTCACAGTTCACCCTTAACAGTTGCTT
GCCCATATCATCATAGTTAGGCACAGGTGTCCCTAGTGCATACTGTTTGA
CTTCAAATCCCATTTTCTGCTATTTGTATACTGAATGCCTCTCAGGAAAG
TGTTCACACTGTGAATCCCAAGTCGCAAATATATAGTCAGCAAAAGAATC
ACTAAGGTCAATGTGAAATTGGTTATGAATAAGTTGGTTACACTCTCAGT
GTGTTATTGTTGTATTCAGATTGCCTGTATGGATGAATCTGGAAGATATT
ATACTCATGCTGGATGACTTCACCTACATATAGACTCTAAGGAAGACCAA
AAGAAGAAGCACAGAGTGCTGAGTTGTCTGCCAGGCAAGGGAATAAGGAA
GCAGAGAATGAAGGTGAAGGGTACAGATCTCCAGCCCCTGCAGAAATTGC
ATGGTCACTANAAAAGAAAGAAGCAGGTGGTGCAAAAGAATGAAAAAACC
CCCCGTCCCTACAGGCCTCCAGAGTAAATGGTGATAAAGGAACAGAAATT
GTCT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXCTGATTTGATTTAGTTGGGTGTAGTATTTATATTGATTT
AAACAATTTTTGGAAGTTAGGGTAGTTGATAAAAGCCTTGAAGTTAGAAT
CAAGAATATAATGTGCCCCTTCTTTATAGAAGGGCAAAAGCAACCTATGT
TAGAAAAGGAGTACTGTGAGCTTTCATGACTTAAAAGCACGTAATTGTAG
TACCAAGAAAAACAGGCTTAAAACAAGTTAATTCTCAAAGAAAACATTCG
TTCTAGATTGGACCTGAATTAGTTGATGTGATGAACTAGATTCGTGGTCA
CAGGTTAGGTGTGCACCATGAAAAGGAAGGTTATTAACAAAGATTAGGTA
ATTTCATTATGCATGTAAGAACCGAGATCTAATGATTAGACAATTTAGCT
GAAAAAGACTTCAGATATAAGATGTATGATAAATGATGTTAAGGTTCTTT
GTAAATAAAAAGTGTCATTGGTAAACATAGGAAAAAACTTACTATAGACT
AGCTTGCTTACACTTTGTTAATCAACCACAAAAGAATTATTGCTCTGGGG
TTAACGTTGAACTTGTGTGAGAGAAAAATTAAAGGGAAATGTTTTATACA
TAATCCCCAAATTTGGGTGAGATTCTCTTTTTTGGCACCGCACGTATATT
TAATTTAGGCGCGATTCCCCTTAAATACAAAATAAACCTTTGTATTTTCT
TCCATTCTCTTTTTCTTCACTTTTCCAAGTGCCCTCATAGTTTT

Query= MSMg01no425_f18.b1 MSMg01no425_f18.b1 CHROMAT_FILE:
MSMg01no425_f18.b1 PHD_FILE: MSMg01no425_f18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:33 2005
         (558 letters)



>mm_chr6_63452090_63453052
          Length = 963

 Score = 1035 bits (535), Expect = 0.0
 Identities = 551/559 (98%), Gaps = 5/559 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattttcctacccagttttgaatagggttttcataacctctgacagtagtaaacc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 gaattcattttcctacccagttttgaatagggttttcataacctctgacagtagtaaacc 704

                                                                       
Query: 65  caacagcatttacagagaattcagacatatgcaagtttttgaactgacaagaaacctttt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 caacagcatttacagagaattcagacatatgcaagtttttgaactgacaagaaacctttt 644

                                                                       
Query: 125 cctcaaccattgaagcattaactaagacatttttctcacactcactataatgatggcagt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 cctcaaccattgaagcattaactaagacatttttctcacactcactataatgatggcagt 584

                                                                       
Query: 185 ggggttcacagttcacccttaacagttgcttgcccatatcatcatagttaggcacaggtg 244
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ggggctcacagttcacccttaacagttgcttgcccatatcatcatagttaggcacaggtg 524

                                                                       
Query: 245 tccctagtgcatactgtttgacttcaaatcccattttctgctatttgtatactgaatgcc 304
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 523 tccctagtgcatactgtttgacttcaaatcccattttctgctatttgtgtactgaatgcc 464

                                                                       
Query: 305 tctcaggaaagtgttcacactgtgaatcccaagtcgcaaatatatagtcagcaaaagaat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tctcaggaaagtgttcacactgtgaatcccaagtcgcaaatatatagtcagcaaaagaat 404

                                                                       
Query: 365 cactaaggtcaatgtgaaattggttatgaataagttggttacactctcagtgtgttattg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cactaaggtcaatgtgaaattggttatgaataagttggttacactctcagtgtgttattg 344

                                                                       
Query: 425 tt-----gtattcagattgcctgtatggatgaatctggaagatattatactcatgctgga 479
           ||     |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 343 ttttcttgtattcagattgcctgtacggatgaatctggaagatattatactcatgctgga 284

                                                                       
Query: 480 tgacttcacctacatatagactctaaggaagaccaaaagaagaagcacagagtgctgagt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tgacttcacctacatatagactctaaggaagaccaaaagaagaagcacagagtgctgagt 224

                              
Query: 540 tgtctgccaggcaagggaa 558
           |||||||||||||||||||
Sbjct: 223 tgtctgccaggcaagggaa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 963
Length adjustment: 10
Effective length of query: 548
Effective length of database: 953
Effective search space:   522244
Effective search space used:   522244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)